Shewanella sp. H8: ABIS04_16895
Help
Entry
ABIS04_16895 CDS
T10623
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sheh03032
]
ABIS04_16895
03036 Chromosome and associated proteins [BR:
sheh03036
]
ABIS04_16895
03400 DNA repair and recombination proteins [BR:
sheh03400
]
ABIS04_16895
DNA replication proteins [BR:
sheh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ABIS04_16895
Chromosome and associated proteins [BR:
sheh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ABIS04_16895
DNA repair and recombination proteins [BR:
sheh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ABIS04_16895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_bac_2
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
XBJ50554
LinkDB
All DBs
Position
3880995..3881267
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIAKIAENAELTKAEAGRALKSFEETVTEAMKNGDKISIVGFGSFETTQRAARTG
RNPQTGKEIQIAAATVPKFKAGKTLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagtgaattaattgcaaaaatcgcagaaaatgcagaactaaccaaagctgaa
gctggccgcgcactaaaatcttttgaagaaacggtaactgaagccatgaaaaacggtgac
aaaatttctatcgttggttttggttcatttgaaaccactcaacgtgctgcacgtactggc
cgtaatccgcaaactggcaaagaaatccaaatcgcagcagcgacagtgcctaagtttaaa
gcgggtaaaaccctaaaagatagcgttaactaa
DBGET
integrated database retrieval system
