KEGG   Shewanella sp. H8: ABIS04_18345
Entry
ABIS04_18345      CDS       T10623                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
sheh  Shewanella sp. H8
Pathway
sheh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sheh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    ABIS04_18345 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sheh02044]
    ABIS04_18345 (gspD)
Secretion system [BR:sheh02044]
 Type II secretion system
  General secretion pathway protein
   ABIS04_18345 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 CarboxypepD_reg
Other DBs
NCBI-ProteinID: XBJ48381
LinkDB
Position
complement(4226874..4229006)
AA seq 710 aa
MKNKGIRHKIIAGMLVGAAMIAAPSAWSEQYAANFKGTDIQEFINIVGKNLNKTIIVDPT
VRGKINVRSYDLLNDDQYYQFFLNVLQVYGYAVVEMENHVIKVIKDKDAKTSAIRVADDK
SPGLGDEMVTRVVPLYNSEAKQLAPLLRQLNDNAGGGNVVNYDQANVLMISGRAAVVNKL
VEIVRRVDKQGDTAIQVVSLNYASAGEIVRIVDTLYRSSANQSQLPGQSPKVVADERMNS
VIVSGDEKSRQRVVELIKRLDAEQASTGNTKVRYLRYAKAEDLVEVLTGFAKNLEDSKDG
TSTKQSGSTQRRSDINIMAHNDTNSLVISAEPDQLRTIESVINQLDIRRAQVLVEAIIVE
ISEGDDVGFGVQWGSTDGGLTQFNNIGPSISEVGAGVLAAQEEEGTTVTVTNSDGGYTTT
TNPTSDGDYTLIAEALGKVNGMAWGVTTGNFAALIQAVSSDTNSNILATPSITTLDNQEA
SFIVGDEVPILTGSTSSSSNDNPFQTVERKEVGVKLKVVPQINEGSSVKLTIEQEVSGVN
GNTGVDISFSTRRLTTTVMADSGQIVVLGGLISEDVQESVQKVPILGDIPYLGWLFKSSS
SSTTKKNLMIFIKPTIIRDGMTMEGIAGRKYNYFRALQLEQQDRGINLMPNTEVPVLEEW
DQEAYLPDEVNDMLDRYKSRKRLSTDVRDSDAALSIINESMQKDKAENND
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgaaaaataaagggatccgacataagattattgctgggatgctggtgggggctgcgatg
atagcggcgccgagtgcgtggtcggaacaatatgccgccaattttaaaggcacagacatt
caagagtttattaatattgtcggtaaaaacctcaataaaaccattattgtagatccaacg
gtacgtggcaaaattaatgtccgtagttatgatttgctaaatgatgatcaatattaccaa
ttctttcttaacgtactccaagtctatggctatgccgtagttgaaatggaaaaccacgtt
attaaagtgattaaagacaaagatgccaaaacctcagctattcgtgttgcggatgataaa
tctcctggtttaggcgatgaaatggtgaccagagtggtgccattatataattctgaagct
aaacagctcgcgccgctattacgccagttaaatgataatgctggtggcggtaacgtggtt
aactatgaccaagctaacgtattaatgatttctggccgtgcggcggtagtgaacaaactg
gtagaaattgttcgccgagttgataaacaaggtgataccgcaatacaggtagtgtcctta
aactatgcctctgcaggtgaaatagtacgtattgttgacacgttatatcgttcaagtgcc
aaccaatcgcagttgccaggacaatcaccgaaagtcgtagccgatgagcgtatgaattcg
gttattgtcagtggcgatgaaaaaagccgtcaacgggtggttgagctaattaaacgtctt
gatgcggaacaagcaagtactggcaacacgaaagtgcgctatttgcgttatgccaaagca
gaagacttagttgaagtgttaactgggttcgcaaaaaacttagaagacagtaaagacggt
actagcaccaagcaaagcggctcaactcaacgtcgcagtgatatcaatattatggctcac
aacgataccaactcgctggtaattagtgctgaacctgatcaacttagaaccattgaaagc
gttattaatcaactggatattcgtcgagctcaagtattagttgaagctattattgttgag
atttccgaaggcgatgacgttggctttggtgtgcaatggggtagcaccgatggtggctta
actcagtttaacaacatcggcccgtcgatcagtgaagttggcgcaggtgtacttgctgca
caggaagaagagggtactaccgttaccgtgactaactctgatggtggatatactacaacc
actaatccaacatcagatggtgattacaccttaattgctgaagcattaggtaaagtcaat
ggtatggcatggggtgttacgacaggtaactttgccgcgttaattcaagctgtatcaagt
gatactaattcaaatattttagccacaccgtcaatcaccaccttagataatcaagaagca
tcatttattgtcggtgatgaggttcctatccttaccggttcaacttccagttcaagcaat
gacaatccttttcagactgttgaacgtaaagaggtgggtgttaagttaaaagttgtgcca
caaattaacgaaggttcttcggttaaattaactatcgaacaagaagtctcaggagttaat
ggcaatactggtgtagacatcagtttctcaacacgccgtttaaccacaactgtgatggcc
gactctggtcaaatagtcgtattaggcgggttaattagcgaagatgtacaggaaagtgtg
caaaaggtccctatcttgggtgacattccttatttaggttggttatttaaatcttcttca
agcagtacgaccaagaaaaatctgatgattttcattaagccaaccatcatccgagacgga
atgacaatggaaggtattgcgggtcgtaaatataattacttcagagcattacagcttgaa
caacaagaccgtggtattaacttaatgcccaatactgaagttcctgtgcttgaagaatgg
gatcaagaagcttacttgccagatgaagtgaatgacatgcttgaccgctataaaagtcgc
aaacgcttgagtactgatgtgcgtgattctgatgcggctttaagcatcattaatgaaagt
atgcaaaaggacaaggctgaaaacaatgactga

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