Shewanella sp. H8: ABIS04_18480
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Entry
ABIS04_18480 CDS
T10623
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
sheh Shewanella sp. H8
Pathway
sheh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
ABIS04_18480 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sheh03011
]
ABIS04_18480 (rpsD)
Ribosome [BR:
sheh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
ABIS04_18480 (rpsD)
Bacteria
ABIS04_18480 (rpsD)
Archaea
ABIS04_18480 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
S4_2
E1_dh
Motif
Other DBs
NCBI-ProteinID:
XBJ48406
LinkDB
All DBs
Position
complement(4254501..4255121)
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AA seq
206 aa
AA seq
DB search
MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGARKPRLSEYGVQLREKQK
VRRIYGVLEKQFRNYYKEAARLKGNTGENLLQLLEVRLDNVVYRMGFGSTRAESRQLVSH
KTVMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVSGQREKPTWVEVDNAKMEG
AFKRIPERSDLSADINEQLIVELYSK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcaagatacttgggtcccaagctcaagctcagtcgcagagaaggtacagaccttttc
ttaaaaagcggtgtgagagcaatcgattcgaagtgtaagctagaaactgcacctggacaa
catggcgcacgtaagccacgtttgtctgagtacggtgtacagctacgcgagaaacaaaaa
gttcgtcgtatttatggagtgcttgaaaagcaattccgtaattattacaaagaagctgca
cgtcttaagggcaataccggtgaaaacctattgcaacttttagaagtccgcctagataac
gttgtttatcgtatgggtttcggttctactcgtgcagaatcacgtcagctagtaagccat
aaaactgttatggttaacggtcgtgttgttaacattccgtcattcaaagtgtctgcgaat
gatgttgtaagcatccgtgaaaagtcacgcactcaagctcgtattaaagcggctttagaa
gtgtctggccaacgcgaaaagcctacatgggtagaagtcgacaatgcgaaaatggaaggt
gcttttaagcgtattccagaacgtagcgatttgtctgcggatattaacgaacagctgatc
gtcgagctttactctaagtaa
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