Shewanella sp. H8: ABIS04_19605
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Entry
ABIS04_19605 CDS
T10623
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sheh03016
]
ABIS04_19605 (mnmE)
Transfer RNA biogenesis [BR:
sheh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ABIS04_19605 (mnmE)
Prokaryotic type
Methyltransferases
ABIS04_19605 (mnmE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
ABC_tran
Dynamin_N
Ras
AIG1
Gtr1_RagA
AAA_28
DUF4702
Roc
MMR_HSR1_Xtn
OspG_kinase
SRPRB
Arf
AGP
AAA_29
Motif
Other DBs
NCBI-ProteinID:
XBJ48612
LinkDB
All DBs
Position
complement(4486497..4487858)
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AA seq
453 aa
AA seq
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MTTDTIVAQATAPGRGGVGIIRISGDLATNVAKAIIGHVPKTRYAEYCDFNNADGQVIDQ
GIALFFKGPNSFTGEDVLELQGHGGQIVLDMLIKRVMEIDGIRIARPGEFSEQAFMNDKL
DLTQAEAIADLIDATSEQAAKSALQSLQGEFSKEVHELVDQVTNLRLYVEAAIDFPDEEV
DFLSDGKIANALYKIISKLDTVQASAKQGSIIREGMKVVIAGRPNAGKSSLLNALAGKES
AIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTLDTVEQIGIERAWAEIASADRVLF
MVDGTTTEAVNPHEIWPDFIDRLPAKLGVTVVRNKADLTGETLDKTEEQGSCVYRISAKT
GLGVDELKHHLKSLMGYQSNLEGGFIARRRHLEALDLAANHLQLGKEQLEVYLAGELLAE
ELRMTQMALSEITGKFTSDDLLGKIFGSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacagacactattgtggcacaagccaccgccccaggacgaggtggcgtaggtatc
attcgcatttctggtgatttagccactaatgtagcaaaagcgattattggccatgtgcct
aaaactcgttacgcagaatattgtgactttaacaatgcagacggtcaggtgattgatcaa
ggtattgcgctattttttaaaggaccaaattcatttactggcgaagatgtcttagaactc
caaggccatggcggccaaatagtacttgatatgctaattaagcgagtaatggaaatagac
ggtattcgtattgctaggcctggtgagttcagcgaacaagcctttatgaacgataaactc
gacttaactcaagcagaagccattgcagacttaattgatgccaccagtgaacaagcagca
aaaagtgcgttgcaatcactacaaggtgaattctcaaaagaagttcatgagcttgtcgac
caagtaaccaatctacgcttatatgtagaagccgcgattgattttcccgatgaggaagtc
gactttctatccgacggtaaaattgccaacgcgttatataaaatcatcagtaaactagac
actgtacaagctagcgccaagcaaggttcaatcatccgcgaaggaatgaaagttgtgatt
gctggccgccctaatgccggtaaatcaagcttacttaatgcattagccggtaaagagtca
gccattgtgactgaaattgcaggaacgactcgcgatgtacttcgcgaacatatccactta
gacggtatgccactgcacattatcgatacggctgggttacgagatacactcgacactgtt
gaacaaataggtatcgaacgcgcatgggcagaaatagccagtgccgatagagtcttgttt
atggtcgatggcaccacaaccgaagctgtgaatcctcacgaaatttggcccgactttatc
gaccgtttaccggcaaaactaggggtaaccgtagtacgaaataaagcagatttaacgggt
gaaaccttagataaaaccgaagaacaaggcagttgtgtttaccggatatcagctaaaaca
ggtttaggtgttgatgaattaaagcatcaccttaaatcattaatgggttatcaaagtaac
ttagagggtggctttattgcccgtcgtcgccatttagaagctctcgacttagccgctaat
cacttacagttgggcaaagaacagcttgaagtgtatttagctggagagttactagcagaa
gaactgcgcatgacacaaatggccttatctgaaatcaccggtaaatttacctcagatgat
ctattgggcaagatttttggttcattctgtattggtaaatag
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