Shewanella sp. JNE2: MZ182_00065
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Entry
MZ182_00065 CDS
T08546
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
shej
Shewanella sp. JNE2
Pathway
shej00071
Fatty acid degradation
shej00280
Valine, leucine and isoleucine degradation
shej00310
Lysine degradation
shej00362
Benzoate degradation
shej00380
Tryptophan metabolism
shej00410
beta-Alanine metabolism
shej00640
Propanoate metabolism
shej00650
Butanoate metabolism
shej00907
Pinene, camphor and geraniol degradation
shej00930
Caprolactam degradation
shej01100
Metabolic pathways
shej01110
Biosynthesis of secondary metabolites
shej01120
Microbial metabolism in diverse environments
shej01200
Carbon metabolism
shej01212
Fatty acid metabolism
Module
shej_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
MZ182_00065 (fadB)
00650 Butanoate metabolism
MZ182_00065 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
MZ182_00065 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MZ182_00065 (fadB)
00310 Lysine degradation
MZ182_00065 (fadB)
00380 Tryptophan metabolism
MZ182_00065 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MZ182_00065 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MZ182_00065 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MZ182_00065 (fadB)
00930 Caprolactam degradation
MZ182_00065 (fadB)
Enzymes [BR:
shej01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MZ182_00065 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
MZ182_00065 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
MZ182_00065 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
MZ182_00065 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UPO31296
LinkDB
All DBs
Position
complement(16948..19098)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQNSNIKALVLTSS
KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCET
ILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGNDQRAEDALK
VGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQSRRNRKLSALTLPKLEAMMSFSTAKGMV
FAVAGKHYPAPMAAVSVIEQASTKGRTEALQIEHQAFIKLAKTDVAKALIGIFLNDQFVK
GKAKKAGKLAKEVKNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLNEAAKLL
SAQVARGRSTPEKMAKVLNNITPSLDYAALKHSDVVVEAVVEHPKIKAQVLAEVEGYVSE
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNGKGFYVYSVDSRGKP
KKDVDPTSYGLLKAAFGELKVFEADDIIARTMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRTKATNNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaattcaagttgagttactcgaggataatattgccaagctg
tgctttaacgcacccggttcggtgaacaaattcgacagagaaaccctcgcttcgctcgat
gccgcattagacagcatcaagcaaaattccaatatcaaagcgttagtgctgacctcaagt
aaagatacctttattgtgggtgccgacattaccgaatttttaggcctattcgcacaagat
gacgccgtactgctctcttgggttgaacaagccaacgctgtcttcaacaaactcgaagac
ttacctttcccaacagcatctgcaatcaaaggctttgccttaggtggcggctgtgaaacc
attctggcaacggattttcgtatcgcagataccacagccaaaatcggtttacctgaaact
aaactcggcatcatcccaggctttggtggcacagttcgtctgccacgtgtgattggtgca
gataacgcacttgaatggatcaccacaggtaacgaccaacgcgctgaagatgcactgaaa
gtcggtgctgtggatgccgtggttgcaccagaagcattagaagcggctgcgattcaaatg
ctcaaagatgctgttgctgaaaagttggattggcaatcacgtcgtaaccgcaagctgtct
gcactaacactgccaaaacttgaagctatgatgtcattctccacagccaaaggcatggtg
tttgcggttgcgggtaaacactacccagcaccaatggccgcagtaagcgtgattgagcaa
gcatcgactaaaggccgcaccgaagcactgcaaatcgagcatcaagcctttataaaactg
gctaaaactgacgttgctaaagcgcttatcggtatcttccttaatgatcaattcgttaaa
ggcaaagcgaaaaaagcgggtaaattagccaaagaagtgaaaaacgctgccgtattaggt
gctggtattatgggcggcggtatcgcctaccaaagtgccagcaaaggcacaccgattgtc
atgaaagacattgcccagccagcattagatttaggtctcaatgaagccgccaaactgctg
tctgcccaagttgctcgtggtcgttcaacgccagaaaaaatggccaaagtgctgaacaac
atcacgccttcattagattatgctgcgctcaaacacagtgatgtcgtcgttgaagccgtt
gttgaacatccaaaaattaaagcacaggttttagccgaagttgaaggctatgtgagtgaa
gatgcaattatcgcatcaaacacctcaacgatttcaatcaacttgctcgctaagagcatg
aagaaacctgagcgtttctgcggtatgcatttcttcaacccagtgcacaaaatgccgttg
gtcgaagttatccgtggtgagcacagctctgaagaaaccatcgcctctgttgtggcttac
gccagcaaaatgggcaaaaccccaatcgtggtaaacgattgcccaggcttcttcgttaac
cgcgtactcttcccttactttgcaggctttaacggcttacttgccgaaggtggcgacttt
gctgcaatcgacaaggtaatggaaaaacaattcggttggccaatgggccctgcttatctg
ctcgacgtagtgggtttagacacaggtcatcacgcccaagccgttatggctgaaggtttc
cctgatcgcatgggtaaatcaggcactgatgcgattgatgtgatgtttgagaacaaacgt
cttggccagaaaaatggcaaaggtttctatgtctattcagtcgatagccgtggtaaaccg
aagaaagatgtcgatcctacgagctacggcctattgaaagctgcctttggcgaattaaaa
gtctttgaagccgatgacattattgcccgtacaatgatccctatgatcatcgaaaccgtg
cgctgtttagaagaaggtattgtcgcatcaccagccgaagcggatatgggcctagtttat
ggcttaggtttcccgccattcagaggcggcgtgttccgttatttggataccatgggtgtc
gcaaactttgtagccttagcagacaaatatgctcacttgggcggtttgtatcaagtcaca
gatgcgatgcgtacaaaagccaccaataacggtagctactaccaagcctaa
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