Shewanella sp. JNE2: MZ182_02295
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Entry
MZ182_02295 CDS
T08546
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shej03400
]
MZ182_02295
Enzymes [BR:
shej01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
MZ182_02295
DNA repair and recombination proteins [BR:
shej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
MZ182_02295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
UPO31696
LinkDB
All DBs
Position
complement(489102..490667)
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AA seq
521 aa
AA seq
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MQLRQQLKHFHSVRLILGDQLNAQHTWYKQVDPKVLYLIAELHQENTYVTHHVQKICAFF
SAMTQFASKLCADGHQVRYLTLDDTQNFADLNALLQHYITETGAIKFEYQRPDEYRLLAQ
LSQLKLANITVNCVDTEHFLLPFAEIDREFPQGQHRMMEHFYRRMRKRFNILIEDGKPVG
GQWNFDASNRQKLKSQDLKSLPTPLMFGHNVEDILERLKRHGINTMGKADMHLLWPINRA
QSLELLRYFCEYCLPAFGRFQDAMTQQHPAQWSLYHSRLSFSLNAKLISPLEVINAVIEH
YQANPHIEIAQVEGFVRQILGWREYVRGIYWANMPQYASINTLEATRKLPDYFWNGKTQM
NCLRHALSQSLDFAYAHHIQRLMVIGNFCLLTEIEPNQVDEWYLGVYVDAIEWVEMPNTR
GMALFADGGIVGTKPYAASGSYINKMSDYCSGCHYKIKERSGALACPFNSFYWRFMNKHR
ARLSQNPRIGMLYQTWDKMEESVRNTILATAEHNLANLNRL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcaattacggcagcaattaaagcacttccattcggtcaggttaattttaggcgatcag
cttaatgcgcagcatacttggtataagcaggtcgatcccaaggtactgtatttaattgca
gaattacatcaagaaaacacctatgtgacgcaccatgtgcaaaagatctgtgcctttttc
agtgctatgacacaattcgccagcaagctttgcgcggacgggcatcaggtgcgttacctc
accctcgacgatacccaaaactttgccgatctgaatgccttactccaacactatatcacc
gaaacaggtgcaattaagtttgaatatcaacggcctgacgaatatcgactgttagcccag
ttaagccaacttaagcttgccaatataacggtgaactgcgtcgatactgagcacttttta
ttaccctttgccgagattgatagggagttcccccaagggcagcacagaatgatggagcat
ttttatcggcgaatgcgcaaaagattcaatatcttaatagaggatggcaagcctgttggt
gggcaatggaattttgatgcgagcaataggcaaaagcttaaatcccaagatctgaaatca
ttaccaacacccttgatgtttggccacaatgtagaagacattctcgagcgccttaaacgc
catggcattaacactatgggcaaggcggatatgcatttactctggccgataaaccgcgcg
caaagcctcgagttgcttaggtatttttgcgagtattgcctgcccgcctttggccgcttt
caagatgcgatgacccagcaacatccggcgcagtggagcctatatcatagccggctgtca
tttagcctaaacgctaaacttatcagcccattagaagtgattaatgcggtgattgagcat
tatcaggccaacccgcatatcgagatagcccaagtcgaaggttttgttcggcaaatcctc
ggctggcgagaatacgttcgcggaatttattgggcgaatatgccgcagtacgccagtatt
aataccctcgaggccacacgcaagctgcccgactacttttggaatggcaagactcaaatg
aattgcctgcgccatgcgttatctcaatcattggattttgcctatgcccatcatattcag
cgcctaatggtgatcggcaatttttgtttattaaccgaaatcgagccaaatcaggtagat
gagtggtatttaggcgtgtatgtggatgcgattgaatgggtcgaaatgcccaatactcgc
ggcatggcactatttgcagatggcggcattgtcggcacaaaaccctatgctgcaagcggc
agttatatcaataaaatgagcgactattgcagcggttgtcattacaaaataaaagaacgt
agcggcgcactcgcttgcccattcaatagcttttattggcgctttatgaataaacatcgc
gcacgattgtcgcaaaacccaaggattggcatgctgtaccagacttgggacaagatggaa
gaatccgtccgaaacaccatattagccactgccgagcacaatcttgccaatctaaaccgt
ttatag
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