Shewanella sp. JNE2: MZ182_02860
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Entry
MZ182_02860 CDS
T08546
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
shej
Shewanella sp. JNE2
Pathway
shej03030
DNA replication
shej03430
Mismatch repair
shej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MZ182_02860 (ssb)
03430 Mismatch repair
MZ182_02860 (ssb)
03440 Homologous recombination
MZ182_02860 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shej03032
]
MZ182_02860 (ssb)
03400 DNA repair and recombination proteins [BR:
shej03400
]
MZ182_02860 (ssb)
03029 Mitochondrial biogenesis [BR:
shej03029
]
MZ182_02860 (ssb)
DNA replication proteins [BR:
shej03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MZ182_02860 (ssb)
DNA repair and recombination proteins [BR:
shej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
MZ182_02860 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
MZ182_02860 (ssb)
Mitochondrial biogenesis [BR:
shej03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
MZ182_02860 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UPO31800
LinkDB
All DBs
Position
625908..626618
Genome browser
AA seq
236 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVLF
GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYSTEVVIDQSGSMQMLGSRGQGVQ
AQGAPMGGGMPQNAGYQSAPQQAAPAQNQYAPAPQAAPAYQAPVQQQYAPPAPAQQQGYG
QPQAQQPQQGGYAPKPQAAPAPAYQAPAAPAQRPAPQPQQNFTPDLDDGWDDDIPF
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgttaacaaggtaattttggttggcaatttgggacaagatccagaa
gtgcgttatatgccaaacggtaatgcagtcgcaaacattacagtagcgactagcgaatcg
tggaaagaccaacagggtcaacagcaagagcgcaccgaatggcaccgtgtggttctgttc
ggcaaattagctgaaattacaggtgaatatttacgtaaaggttcacaggtttatcttgaa
ggtaaactgcaaacccgtaagtggaaagaccaaagcggtcaagatcgctacagcactgaa
gtggttatcgatcaaagcggtagcatgcaaatgctaggtagccgtggtcaaggtgttcaa
gcacaaggtgcgccaatgggcggcggtatgccacaaaatgcaggctatcagtcagcacct
cagcaagccgctcctgcacaaaatcagtatgcgccagcgcctcaagcagcacctgcttac
caagcgccagttcagcaacaatatgctccgccagcacctgctcagcaacaaggttatggt
cagccacaggctcaacaaccacaacaaggtggttatgcgcctaagccacaagccgctcct
gcgccagcttatcaagcgccagcagcaccagcacagcgtccagcaccacagccacaacag
aattttacgccagatttggatgatggctgggatgacgatattccgttctag
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