Shewanella sp. JNE2: MZ182_03175
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Entry
MZ182_03175 CDS
T08546
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shej
Shewanella sp. JNE2
Pathway
shej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MZ182_03175 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shej03019
]
MZ182_03175 (groL)
03110 Chaperones and folding catalysts [BR:
shej03110
]
MZ182_03175 (groL)
03029 Mitochondrial biogenesis [BR:
shej03029
]
MZ182_03175 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shej04147
]
MZ182_03175 (groL)
Enzymes [BR:
shej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MZ182_03175 (groL)
Messenger RNA biogenesis [BR:
shej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MZ182_03175 (groL)
Chaperones and folding catalysts [BR:
shej03110
]
Heat shock proteins
HSP60 / Chaperonin
MZ182_03175 (groL)
Mitochondrial biogenesis [BR:
shej03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MZ182_03175 (groL)
Exosome [BR:
shej04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MZ182_03175 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MZ182_03175 (groL)
Exosomal proteins of breast cancer cells
MZ182_03175 (groL)
Exosomal proteins of colorectal cancer cells
MZ182_03175 (groL)
Exosomal proteins of bladder cancer cells
MZ182_03175 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UPO31858
LinkDB
All DBs
Position
706121..707749
Genome browser
AA seq
542 aa
AA seq
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MAAKEVVFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKALSQPCADSKAIAQVATISANSDESIGEIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTV
IAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQTQIAARVSQIKQQVEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RVASKIADVEVLNEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANTVKNGSGNFGYNA
GNDTYGDMLEMGILDPTKVTRCALQFAASIAGLMITTEAMVAEIPQNSAPDMGGMGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttgtatttggtaatgacgctcgtgtaaaaatgttggctggtgta
aatattctcgcgaacgcagtgaaagtgaccttaggccctaaaggccgtaacgtggtatta
gacaagagcttcggctcaccactgatcactaaagacggtgtttctgttgccaaagaaatc
gagttagaagacaaattcgaaaacatgggcgcgcaaatggtgaaagaagttgcttctaaa
gccaacgacgccgccggtgatggtactactacagcaactgtactggctcaagccattgtg
actgaaggcttaaaagccgttgcagccggtatgaacccaatggacctgaagcgcggaatc
gacaaagccgttatcgctgccgttgctgaattaaaagctttatcacaaccttgtgcagat
tcaaaagcgattgcacaagttgcgactatctctgcaaactctgacgaatctatcggcgaa
atcatcgcaactgcgatggaaaaagtcggtaaagaaggcgtgatcacagtcgaagaaggc
caagcgctggaaaacgaactggacgtagtagaaggtatgcagttcgaccgtggctacctg
tctccatactttatcaacaagccagaaacaggcagcgttgaattagatcacccattcgtc
ctgttagtagacaagaaaatctctaacattcgcgaactgttacctatccttgaaggtctg
gcaaaaacgggtaagccattgcttatcgttgctgaagacgttgaaggcgaagcattagca
actttagttgtgaacaacatgcgcggtatcgtgaaagtggctgctgttaaagcacctggc
tttggcgatcgtcgtaaggcaatgctgcaagacgtagcaatcctgactggcggtactgtt
attgctgaagaaatcggcctagagcttgaaaaagcaaccctggaagatttaggtacagct
aagcgtgttgtgatcactaaagacaacaccaccatcatcgatggtaacggcgagcaaaca
caaattgctgctcgtgtaagccaaatcaaacaacaagttgaagaatcaacgtcagactac
gacaaagaaaaactgcaagagcgtatggctaaactagctggcggcgtagcagtgattaaa
gttggcgcagcgactgaagttgaaatgaaagagaaaaaagcccgcgttgaagatgctctg
catgcaactcgcgctgcggtagaagaaggcgtggttcctggcggcggtgttgctctggtt
cgcgtagcttctaagatcgctgacgttgaagtattaaacgaagaccaaaaacacggtgtg
gttatcgcactgcgtgcaatggaagcaccactgcgtcaaatcgccacgaacgcgggtgaa
gaagcgtcagttgttgctaacacagtgaagaacggcagcggtaacttcggttacaacgcc
ggtaacgacacttacggcgacatgttagaaatgggtatccttgacccaactaaagtgact
cgttgtgcgttgcaattcgcagcatcaattgctggcctgatgatcaccacagaagctatg
gttgctgagatcccacaaaattctgcgccagatatgggcggaatgggcggaatgggcggc
atgatgtaa
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