Shewanella sp. JNE2: MZ182_03550
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Entry
MZ182_03550 CDS
T08546
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shej03016
]
MZ182_03550 (tcdA)
Transfer RNA biogenesis [BR:
shej03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MZ182_03550 (tcdA)
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Gene cluster
GFIT
Motif
Pfam:
ThiF
Pyr_redox_2
Sacchrp_dh_NADP
NAD_binding_7
DAO
AdoHcyase_NAD
3HCDH_N
ELFV_dehydrog
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
UPO31927
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All DBs
Position
complement(780554..781366)
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AA seq
270 aa
AA seq
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MTEAYQNRFGGIGRLYGQKALAKFARSHVVVVGIGGVGTWAAEALARSGIGQISLIDLDD
ICVTNTNRQIHALTSTIGRSKVAVMAQRIRDINPDCQVNEIENFITIDNLGDYLLGAKEG
GNIDYVIDCIDAVKQKAALIAWCKRQKIKIVTVGGAGGQTDPTQIQLADLAKTYQDPLLA
KVRNILRREYHFSKNVQRRFAIDAVFSSEQLVYPQADGSVCNAKATADGSMRMDCASGFG
AVTMVTGTFGFVAASRVLSRLAHIANEADQ
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagcctatcagaatcgctttggtggaattggccgtttatacgggcaaaaggcg
ttagcaaaatttgcccgttcccatgtggtggtggttggtattggtggcgtaggaacttgg
gccgcagaagcattagcacgcagtggtatagggcaaattagcttaattgatctagatgat
atctgcgtgaccaacactaatcgccaaattcatgcattaacatcgacgattggtcgctca
aaagttgcagtaatggcacaacggatccgtgatattaatcctgattgccaagttaatgaa
attgaaaattttatcactattgataacctaggtgactatttacttggcgccaaagaaggc
ggcaacatcgattatgttattgattgtattgatgcggtgaaacaaaaagcggcccttatt
gcttggtgtaaacggcaaaagatcaagatagtgacagtcggtggcgcgggtggtcaaacc
gatcctacccaaattcaactcgccgatctcgctaaaacttatcaagatcctctgctggct
aaagtgcgtaatattttacgccgtgaatatcacttctctaaaaacgtgcaacgtcgtttt
gctatagatgccgtattttccagtgaacagttagtgtatccccaagcagatggttcggta
tgtaacgctaaggcaaccgccgatggtagcatgcgaatggattgtgcttccggctttggt
gctgtcactatggtcacaggcacctttggttttgtcgctgcaagccgagtattatcaagg
ttggcacacattgccaatgaggccgaccaataa
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