Shewanella sp. JNE2: MZ182_04295
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Entry
MZ182_04295 CDS
T08546
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shej03009
]
MZ182_04295
Enzymes [BR:
shej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
MZ182_04295
Ribosome biogenesis [BR:
shej03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
MZ182_04295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UPO32070
LinkDB
All DBs
Position
complement(943054..943782)
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AA seq
242 aa
AA seq
DB search
MRLAKYLAQCGIGSRREACRLINAGRITLNGKIAKHTDLVQRDAQGLCLDSICLDAEPIV
ETEALAYWIFNKAVGTDCRLLEQDKTSLLHLLPKAPRLYPVGRLDKDSRGLLLLTNDGDL
THKLMHPSFAHSKTYHVRLDKPFTDDFVEQMASGVRYKDLQTLPCQVRRLSLDSFEIVLT
QGLNRQIRHMSKALGYRVIDLERVTIMALNLRELASGELPEGQMRPLTKSEIAELKAVLA
TK
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttagcaaaataccttgcccaatgcggcattggctctcgccgtgaagcctgccgt
ttgattaatgctgggcgtattacacttaatggcaagatagccaaacataccgacctagtt
caacgcgatgctcaaggtctatgccttgatagcatttgcttagatgcagagcccatagtt
gaaacagaagcactcgcttattggatattcaataaagctgtcggcaccgattgccgtttg
cttgagcaagataaaacgagcttattgcatctgcttcccaaagcgccaagactctacccc
gtcggcaggctagataaagattcccgcggcctgttgctgttaactaacgatggtgatctg
acccataaactgatgcaccccagctttgcccacagtaaaacctaccatgtgcgcctcgat
aagccattcactgatgattttgtagaacaaatggcaagtggagtgcgttataaagatctg
caaaccctgccctgccaagtacgccgcctcagtttggacagctttgaaatcgtgctgact
caaggattaaatcgacaaattcggcatatgtccaaggcactcgggtatcgcgttatcgat
cttgagcgcgtcactataatggcgctgaatttacgcgaattagcatctggtgagttacca
gaagggcaaatgcggccactgacaaaatcggaaattgcagagctaaaagcagtgctggcg
acaaaataa
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