Shewanella sp. JNE2: MZ182_04540
Help
Entry
MZ182_04540 CDS
T08546
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shej
Shewanella sp. JNE2
Pathway
shej00061
Fatty acid biosynthesis
shej00071
Fatty acid degradation
shej01100
Metabolic pathways
shej01212
Fatty acid metabolism
shej02024
Quorum sensing
shej04146
Peroxisome
Module
shej_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MZ182_04540
00071 Fatty acid degradation
MZ182_04540
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MZ182_04540
09145 Cellular community - prokaryotes
02024 Quorum sensing
MZ182_04540
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shej01004
]
MZ182_04540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shej04147
]
MZ182_04540
Enzymes [BR:
shej01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MZ182_04540
Lipid biosynthesis proteins [BR:
shej01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MZ182_04540
Exosome [BR:
shej04147
]
Exosomal proteins
Exosomal proteins of breast milk
MZ182_04540
Exosomal proteins of breast cancer cells
MZ182_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UPO32116
LinkDB
All DBs
Position
complement(999171..1000772)
Genome browser
AA seq
533 aa
AA seq
DB search
MAYDQDSQLTLSYSSLVDLIEKTSLRYGDKPAYACLGKTSSFNEIERDSRYFAAYLQNKT
QLKPGDRIAIQLPNITQFVIAAYGAIRAGLILVNTNPLYTERELIHQFNDSGAKALVVLS
DLLPTLAKVVATTEIELVISTHALDLIEPQIQPKTGLKNIAFYDILKQGAELTFTRLAPT
LDDLCALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVISEGEDIFVAPLPIYHIYA
FMVNLVLYFECGGCSVLIPNPRDISGLIKTLTKYPFTGFAGLNTLFVALCHQPEFKALDF
SHLKITISGGTALTAAAANIWQQTTGNMISEGYGLSETSPVISLNAPGYQKLGTIGKPVI
GTEVKLLDENNIEVPLGTAGELAARGPQVMRGYWNNPQETANVMTPEGFFKTGDIAIATA
EGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPDIIECAVVGVQDEHSGEAVKAFIVLK
DNNLNHEQAKSTILQYCREQLTGYKLPKIIEFMTQLPKSTVGKILRRELKNKA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgatcaagactcccaactcacactcagctattcatcattggtcgatcttatt
gagaaaaccagcttacgttatggtgataaacccgcctatgcttgcttgggtaaaaccagt
agttttaacgagatagagcgagactcccgttactttgccgcctatttgcaaaacaagacc
caactcaaacctggcgatcgtattgcaattcaattacccaatatcacgcaatttgttatt
gcagcctatggtgctattagggctgggctcattctagtcaacaccaatcctctctataca
gagcgcgaacttatccatcagtttaatgattcaggagccaaagccttagttgtactatcg
gatttgctgccaaccttagcaaaagtggtcgccactaccgagattgaattagttatctca
acccatgctctggatttaatagagcctcaaattcagcctaaaacgggcctgaaaaatatc
gcgttctacgatattttaaagcaaggcgcagaactgacctttacccgcctagcgcccaca
ctcgatgatctctgtgcattgcaatatacaggcggtacaacgggattatctaaaggagcc
atgttgacccacggcaatatgctcgccaatgccgcgcaggtaaaatcccgcattggtagc
gtgatatctgaaggtgaggatatttttgttgcgccgctaccgatttaccatatttatgcg
tttatggtgaacttagtgctgtattttgagtgcggtggttgctcggtattaatcccaaat
ccccgggatatcagtggcttaattaagactctcactaaatatccttttactggttttgct
gggctcaataccttatttgtcgctctgtgccatcagcctgaatttaaagcactggacttt
agccatttaaaaattaccatctcaggtggtacagcgctcacggccgcggcggccaatatt
tggcaacaaaccacgggtaatatgatcagcgaaggttatggattatctgaaacctcccct
gtcatttcactcaatgcgcccggttatcaaaagctcggcactattggtaaacctgtgatt
ggtactgaggtcaaactattagatgaaaataacattgaagtacctttagggactgcagga
gaattagctgcgcgcggcccgcaggtgatgcgaggatattggaataacccacaagaaacc
gccaatgtgatgacaccagagggcttctttaaaacaggcgatattgccatagcaacggcg
gaaggtttccatcaaattgttgatcgcaaaaaagatatgatcatcgtgtcaggctttaac
gtctaccctaatgaagttgaaaatgtgcttgccagtcatcccgatatcattgagtgcgcg
gttgttggtgtacaagatgaacactcgggggaagcggtcaaagcctttatcgtcctcaag
gacaataacctcaatcatgaacaggctaaaagtacaattttgcagtattgccgcgagcaa
ttaacgggttataaattacctaaaatcattgagtttatgacgcaattacctaaaagcacc
gtcggtaaaattctgcgccgcgaacttaaaaataaggcttaa
DBGET
integrated database retrieval system
