Shewanella sp. JNE2: MZ182_04650
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Entry
MZ182_04650 CDS
T08546
Symbol
lptD
Name
(GenBank) LPS assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shej02000
]
MZ182_04650 (lptD)
Transporters [BR:
shej02000
]
Other transporters
Pores ion channels [TC:
1
]
MZ182_04650 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_N
LptC
OstA_2
Motif
Other DBs
NCBI-ProteinID:
UPO32138
LinkDB
All DBs
Position
complement(1020361..1022658)
Genome browser
AA seq
765 aa
AA seq
DB search
MQIRYFLALSLLPQLVLADESPTTTASQCVIEPPVPRIESHTEGMSAAELNKIRIISDSS
NAEMNKQAIFSGNVVFSQGDRHIAADEAILNQETQQFDANGNLVFQDSNFTVTAQSLQAQ
MRSNRATLEGAKYWLHGQQVNGDAEKLQITINNNLILTNTNFTTCPPDNVSWLLEAEKIK
INSEEEWGEIWNAKVRIAGVPVFYIPYMTIPVSDKRKSGFLYPSFSTSTTSGFEVSAPYY
WNIAPEYDLTFTPNYMSNRGIFTKTEFRYLAGDAQNGRLNLEYLGNDQLLSSRPNRYLYN
WQHQGAIDKHWRVMSNFTEVSDNNYFNDLKSDVNRATDNQLSRIGEVSYFENNWDLSTRV
QDIKVLGEEEKPYQVMPQVNFNFRAADFWSNLDFGFNSELTNFAHQDNDVNTATRLHMAP
SISLPIHGPSGSLTSQVKLMQTNYWQTNLDPNKNLDDSINRTIPQVRINGQINFERFTEL
FEQNYRQTLEPQFQYLYVGYEDQRNIGIYDTAQLQDDYYGLFRDRRFSGLDRIADANQMT
LGVTTRLFDDHNQEVTKFSLGQIFYLEDSKLGHEDSIFEQNQSTSILAAELDTRLTQDWY
LGAAIQYDTNTSDNKKTEATLDFRPEANKLLQLSYRYVPDLLNSNTNDLANISQAGVRAA
WPINDSLYFVGNWYYDLNENRSVETYTGFQYESCCYALRLSYHYRIKTNYDDNIGSSAID
SRELFESGVYFNVIIKGLGGSGPLGVTDMLNDGLFNYRKPLYLRN
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcagatccgttactttctggccctgagcctgttaccgcaattagtcctggcagacgaa
tctcctactacgaccgcatcccaatgcgtcattgaaccgccagtacccagaattgaatcc
cacactgagggaatgagtgcggctgaactcaataaaattcgtattatttctgacagttcc
aatgcagaaatgaacaaacaagccatttttagtggcaatgtcgtctttagccaaggagac
cgacatatcgctgcagatgaagcgattctgaaccaagagactcagcaatttgatgccaat
ggcaatctcgtgtttcaagacagtaacttcactgttacagcacagtccctacaagctcag
atgcgctctaatcgcgccacgttggaaggcgctaaatactggctacatggacaacaagtg
aatggtgatgctgaaaaattgcaaatcaccatcaacaataatcttattttaaccaatact
aatttcaccacttgccctcctgacaatgtatcttggctgcttgaggccgagaaaatcaaa
atcaacagtgaagaagagtggggggaaatttggaatgccaaagtaagaatcgcgggggtc
cctgtattctacattccctacatgacaatccctgtttctgataaacgtaaatcgggtttt
ctctatcctagctttagtacaagtacgacgagcggttttgaggtttcagcaccttattac
tggaacattgcgccagaatatgatctcacattcacgcctaattatatgtctaacagaggg
atattcactaagactgaattccgctatctggccggagatgctcaaaatggccgcttaaac
ttagaatatttaggcaatgaccaattactcagtagccgacctaatcgttatttatacaac
tggcagcaccaaggcgctattgataagcattggcgggtaatgagtaactttactgaggtg
tcagataacaactattttaatgatttgaaatcagatgttaaccgcgcgaccgataatcaa
ctatcccgaattggggaagtgagttactttgaaaacaattgggatttaagtacccgagtc
caagatattaaagtccttggtgaagaagaaaagccttatcaagtcatgccacaggttaac
tttaacttcagagcggctgatttttggagcaacctagattttggttttaattctgaatta
actaattttgcccatcaggataatgacgttaacaccgcgacacgtttgcatatggcgccc
agtatctccttacctatccatggtccctctggctcactgactagccaagtcaaattaatg
caaaccaattattggcaaacgaatctcgatccaaataaaaatctggatgacagtattaat
cgaaccattccacaggtacggattaatggtcagatcaactttgaacgttttactgagtta
tttgagcaaaattatcgccaaacacttgaaccacaatttcaatacctctatgtaggatat
gaagatcaacgaaatatcggcatttacgataccgctcaattgcaagacgactactatggt
ctattccgtgatcgccgcttctcaggccttgatcgcattgcggatgccaatcagatgacg
ctcggtgtgaccacccgtctctttgatgaccacaaccaagaagtcactaaattcagcctt
gggcaaattttttatttagaagacagtaaactcggccacgaagatagtatttttgagcaa
aatcaatcgacttctatacttgctgccgaattagatactcgtctcactcaagactggtac
ttaggtgctgcaattcagtacgataccaataccagcgataataaaaaaacagaggcaacc
ctagactttaggcccgaagccaacaaattactgcagcttagttaccgctacgtacccgat
ttgctgaactcaaataccaacgatctcgccaatatctcccaagcgggagtacgcgcagct
tggcccattaatgacagtctctattttgtgggtaactggtactatgatctcaatgaaaac
cgcagcgtcgaaacctacacaggttttcaatatgagtcttgctgctatgcacttcgactc
agctaccactatcgaataaaaactaattacgacgacaatataggctcatctgctatcgac
agtcgcgaactgtttgaaagtggtgtgtattttaatgtcatcattaaaggactcggaggc
tctggcccactcggtgtcaccgatatgctcaatgatggcctgtttaactacagaaaaccg
ctttacctgaggaattag
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