Shewanella sp. JNE2: MZ182_04805
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Entry
MZ182_04805 CDS
T08546
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shej03009
]
MZ182_04805
Enzymes [BR:
shej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
MZ182_04805
Ribosome biogenesis [BR:
shej03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
MZ182_04805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SNF5
Motif
Other DBs
NCBI-ProteinID:
UPO32167
LinkDB
All DBs
Position
1053950..1054660
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AA seq
236 aa
AA seq
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MQSKRGRLDRYLSAKMQMPRKLVRDLLLSGRVQVDGQIVKEMDRQVDEFSHIQLDDQVLQ
ANTPVYMMLHKPVGVVSATKDNQHKTVIDLLDNEYRHELHIAGRLDLNSSGLLLLTNDSR
WSEALMSPTEKVDKVYRVTLANPLTHDYVTAFAEGMYFGFEDITTQPAKLVILDSHLAEV
TLKEGKYHQIKRMFGRFRNPVIGLHRLSIGDIVLDEQLQPGESRTLTAAEIVCIKI
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctaaacgtggtcgactcgatagatatttaagcgcgaagatgcagatgccccgc
aaattagtgcgtgatttattgctatctgggcgtgtgcaagtggatgggcagattgttaaa
gagatggacagacaagtggatgagttttcccatatccaactcgatgatcaagttttacag
gccaatactccggtttatatgatgttacataagcctgttggcgtggtgagtgcgactaag
gataaccaacataagacggtaatcgacctacttgataatgaatatcggcacgaattgcat
atcgcgggtcgactggatttaaattcttctggattattgctcctgactaacgatagtcga
tggtccgaggcgcttatgtcaccaacagaaaaagtcgataaagtgtatcgtgtgacgctt
gcaaatccactaacacatgattatgtaacagcatttgctgaaggtatgtattttggtttt
gaagatatcacgactcaacccgcaaaactggttatcctcgattcccatttggctgaagtg
acgttaaaagaaggtaaataccatcaaataaagcgtatgtttggccgatttcgtaatcct
gtgattggtctacatcggttatccattggtgacatagtgttagatgaacagcttcaacct
ggtgagagtcgaactctcaccgcggctgagattgtttgcataaaaatctaa
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