Shewanella sp. JNE2: MZ182_05210
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Entry
MZ182_05210 CDS
T08546
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
shej
Shewanella sp. JNE2
Pathway
shej00250
Alanine, aspartate and glutamate metabolism
shej00310
Lysine degradation
shej00350
Tyrosine metabolism
shej00650
Butanoate metabolism
shej00760
Nicotinate and nicotinamide metabolism
shej01100
Metabolic pathways
shej01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
MZ182_05210 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MZ182_05210 (gabD)
00310 Lysine degradation
MZ182_05210 (gabD)
00350 Tyrosine metabolism
MZ182_05210 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
MZ182_05210 (gabD)
Enzymes [BR:
shej01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
MZ182_05210 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
MZ182_05210 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
MZ182_05210 (gabD)
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Motif
Pfam:
Aldedh
DUF742
Motif
Other DBs
NCBI-ProteinID:
UPO32240
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Position
1147942..1149390
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AA seq
482 aa
AA seq
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MQLNDPSLLRQQSFINGQWCDAVSGDTLKVVNPATNAVIGYVPNMGQVETEMAIKAAEAA
LPAWRALTAKERGAKLRRWFELLNENSDDLALLMTTEQGKPLAEAKGEVTYAASFIEWFA
EEAKRIYGDTIPGHQGDKRLMVIKQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVK
PAHQTPFTALAMAELAERAGIPAGVFSVLTGDAVQIGNEMCANPIVRKLSFTGSTNIGIK
LMAQCAPTLKKLSLELGGNAPFIVFNDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQDG
VYDEFALKLSTAVGKLKVGEGINEGVTTGPLINAAAVEKVQSHLIDAIAKGASVLAGGKV
HDLGGNFFEPTVLTNVDKSMRVAREETFGPLAPLFKFSDVDDVIKQANDTEFGLAAYFYG
RDISLVWKVAEALEYGMVGVNTGLISTEVAPFGGIKSSGLGREGSKFGIEEYLEIKYICM
SV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgcaattaaatgatccgagtttgctacgtcaacagtcttttattaatggtcaatggtgt
gatgccgtttctggtgacacgctaaaggtggttaatcccgcaaccaatgccgtgattggc
tacgttcctaatatgggacaagttgaaactgagatggcgattaaggcggcagaagcggct
ttacctgcatggcgcgcactcacagccaaagagcgcggcgctaagttaaggcgttggttt
gaattactcaatgaaaacagtgatgacttagcattgctcatgacgactgagcagggtaaa
ccgctggcagaagccaagggtgaagtaacctatgccgcttcgtttatcgagtggtttgcc
gaagaagcgaaacgtatttatggcgataccattcctgggcatcaaggggataagcgcttg
atggtaattaagcagcctgtcggtgtaaccgccgcgattacgccgtggaactttcctgct
gcgatgatcacccgcaaagccgctccagcgttagctgcgggttgcactatggtagtaaaa
cctgcgcaccaaaccccctttaccgcattagcgatggcagaactcgctgagcgtgccggt
attcctgcgggcgtatttagtgtgttaacgggtgatgcggtgcagattggcaatgaaatg
tgtgctaatcccatagtgcgtaaattatccttcacgggctcaaccaatatcggtattaaa
ttaatggcgcaatgtgcgcctaccttaaaaaaactgtcgctagagcttggtggcaatgcg
ccatttatcgtatttaacgatgccaatatcgatgccgccgttgaaggcgccatgatagct
aagtaccgtaatgccggccaaacttgtgtctgcgctaaccgtatttatgtgcaagacggg
gtatacgacgagttcgccttaaaactcagcactgctgtgggcaagcttaaggttggagag
ggtatcaacgagggggtcacgactggcccgctgatcaatgctgccgcagtcgagaaagtg
caaagtcaccttattgatgccattgcaaaaggcgcatcagtgctcgcgggtggcaaagtc
cacgatcttggcggtaatttcttcgagccaaccgtactcaccaatgttgataaaagcatg
cgtgttgcccgcgaagaaacctttgggccactcgcgccgctgtttaaattcagtgatgtc
gacgatgtgattaaacaggctaacgatactgaatttggcctcgccgcctatttctatggc
cgcgatatttcattggtttggaaagtcgccgaggccttggaatacggcatggttggcgtt
aacactggtttgatttcgacggaagtcgcgccctttggtgggattaaatcttcagggctg
ggccgcgaaggttctaagtttggcatcgaagaatatttagaaatcaaatatatctgtatg
tccgtttaa
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