Shewanella sp. JNE2: MZ182_05430
Help
Entry
MZ182_05430 CDS
T08546
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
shej
Shewanella sp. JNE2
Pathway
shej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MZ182_05430 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shej03019
]
MZ182_05430 (rppH)
Messenger RNA biogenesis [BR:
shej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MZ182_05430 (rppH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
UPO32282
LinkDB
All DBs
Position
1199384..1199908
Genome browser
AA seq
174 aa
AA seq
DB search
MIDSDGFRANVGIIICNRYGQVMWARRFGQHSWQFPQGGVDDGESAEEAMYRELYEEVGL
RPEHVHILTSTRSWLRYRLPKRLVRQDSKPVCIGQKQKWFLLQLKSQDSAINLSSSGHPE
FDDWRWVSYWYPVRQVVSFKRDVYRKVMKEFAATALSFQTQEIPRKRGRQKTTG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatagcgacggctttcgcgcaaatgtgggcataataatttgtaacagatatggt
caagttatgtgggctagacgttttggccaacattcttggcaattccctcaaggtggtgtt
gacgatggtgagtcagcagaggaggctatgtaccgtgagttatatgaagaagtcggccta
agacccgaacacgtacatatattaacctcgactcgttcttggttaaggtatcgtctacct
aagcgtttagtgaggcaagacagtaaaccagtctgcattgggcaaaagcaaaaatggttt
ctgttacaattgaaaagccaagatagtgcgattaatttaagttcttcagggcatcctgaa
tttgacgattggcgttgggtaagttattggtatcccgtgcgacaagtcgtttcatttaag
cgtgatgtatatcgaaaagtgatgaaagagtttgcggcaacggcattgtcattccaaacc
caggaaattccgaggaagcggggaaggcaaaaaacgacaggctga
DBGET
integrated database retrieval system
