Shewanella sp. JNE2: MZ182_08790
Help
Entry
MZ182_08790 CDS
T08546
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shej
Shewanella sp. JNE2
Pathway
shej00061
Fatty acid biosynthesis
shej00071
Fatty acid degradation
shej01100
Metabolic pathways
shej01212
Fatty acid metabolism
shej02024
Quorum sensing
shej04146
Peroxisome
Module
shej_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MZ182_08790 (fadD)
00071 Fatty acid degradation
MZ182_08790 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MZ182_08790 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
MZ182_08790 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shej01004
]
MZ182_08790 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shej04147
]
MZ182_08790 (fadD)
Enzymes [BR:
shej01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MZ182_08790 (fadD)
Lipid biosynthesis proteins [BR:
shej01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MZ182_08790 (fadD)
Exosome [BR:
shej04147
]
Exosomal proteins
Exosomal proteins of breast milk
MZ182_08790 (fadD)
Exosomal proteins of breast cancer cells
MZ182_08790 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
UPO32900
LinkDB
All DBs
Position
1959398..1961071
Genome browser
AA seq
557 aa
AA seq
DB search
MDQPWINHLPKDVPAEINVDQYSSLVDMFETAVAKYADQPAFINMGATLTYRKLEERSRA
FAAYLQNELKLEKGDRVAIMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELKHQLIDS
GAKAIVVVSNFARTLEEVVDQTPVKSVIITGLGDLLSAPKRTLVNFVVKYIKKLVPKYDL
PHALSMRDTLTRGRRLQYIKPIITNDDLAFLQYTGGTTGVSKGAMLTHKNVVANVLQADG
AYSPTLKDGSEFVVTALPLYHIFALTVNCLLFLHKGSQNLLITNPRDIPAFVAELKKYPF
TALTGVNTLFNALVNSDDFSQLDFSRLKLSIGGGMAVQKAVADKWQNITKTRLLEGYGLT
EASPLLTCCPYNLDGYNGSIGFPAPSTLIQIRDDAGNVLPQGETGELFGKGPQVMKGYWQ
RPEETAKVIDKDGWLATGDIGYMDEKGFFYIVDRKKDMILVSGFNVFPNEVEEVVALHPK
VIEVAAVGVPNEASGELVKVFVVAKDKSLTADDIIKHCRIHLTGYKVPKLVEFRDELPKT
NVGKILRRELRDEVKRT
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggaccagccttggattaatcatttgccaaaagatgtgcctgctgaaatcaatgttgat
cagtattcatcgcttgtcgatatgttcgagacagcggtagctaaatatgctgatcaacct
gcatttatcaatatgggtgccacactcacttatcgtaaattggaagagcgcagccgtgcc
tttgccgcttatctgcaaaatgagttaaagctcgaaaagggtgatcgtgttgcgattatg
atgccgaatcttttgcaatatcctattgcattgtttggtgttttacgtgcaggtatggtg
gttgttaacgtcaatccgctttacactccccgtgagcttaagcaccagttaattgattcc
ggcgccaaagccattgtcgtcgtatcaaactttgcccgtaccttagaagaagtcgtggat
caaacgccagtcaaaagtgtcattattacggggctgggtgatttactcagcgcaccgaag
cgaactttagtgaattttgttgttaaatacattaagaagctagtgcctaaatatgatttg
ccccatgccttatcaatgcgcgataccttaacaagggggcgccgtttgcaatatattaag
ccaattatcactaatgatgatttggctttcttacaatacacaggtggcacaacaggggta
tctaaaggtgccatgttgacccacaaaaatgtggttgcaaacgtgctccaagccgatggt
gcgtattctccaacccttaaagatggtagtgagtttgtcgtcacagcattgcctctgtac
catatttttgcgttaacggtgaattgcctattgtttttacacaagggcagtcagaatctt
ttgatcaccaatccccgtgatattccagcctttgtggcagagcttaaaaaataccctttc
accgcattaactggggtgaatacgttatttaatgcgcttgtgaacagtgacgatttttcg
caacttgatttttcccgtttaaagctgtctatcggtggtggtatggcagtacaaaaagcg
gttgcggataaatggcaaaatattactaaaacccgcttactggaaggttatggtttgaca
gaggcttcacctctgctcacttgttgcccttataatttagatggttacaacggttctatt
ggttttccagcgccatcgaccttgatccaaatacgtgatgatgcgggtaatgtgttgccc
caaggcgaaaccggtgagttatttggtaaaggcccacaggtgatgaaaggctactggcag
cgtccagaagaaacggccaaagtcattgataaagatggttggttagctacgggcgatatt
ggttatatggacgaaaaaggctttttctatatcgttgaccgtaaaaaagatatgatttta
gtctcaggatttaacgtcttccctaatgaagtagaagaggtcgttgccctgcatcccaag
gttatcgaagtcgcggctgtaggtgtaccaaatgaggctagcggagaattagtgaaggtt
tttgtggtggcaaaagataaatcgttaaccgcagatgacatcattaagcattgtcgtatt
catttaacgggatataaagtgccgaagctggtagaatttagggacgagttacctaaaacc
aatgtgggtaagatcttgcgacgagagcttagagacgaagttaagcgtacgtaa
DBGET
integrated database retrieval system
