Shewanella sp. JNE2: MZ182_09620
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Entry
MZ182_09620 CDS
T08546
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shej01002
]
MZ182_09620
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shej01011
]
MZ182_09620
Peptidases and inhibitors [BR:
shej01002
]
Cysteine peptidases
Family C82
MZ182_09620
Peptidoglycan biosynthesis and degradation proteins [BR:
shej01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
MZ182_09620
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UPO33047
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Position
2133754..2135208
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AA seq
484 aa
AA seq
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MEHAKLPWLIKHGRLFKIVVCSLLFLGMFVSNTLRATSPLDSRINVNSFQQYPFLLEQTL
LFDLAGVNPLFNKNYQALSQAKTEPVQPDDMVRMQGQVTAYWLHISALSGCDAVMTNNTN
ADPMSDIHYQAVLKKISQLIQLESQFSWETLMLENKLTVGQTHPIVNTIAKRLWLLGDMP
KEVDVEQVYTDELMLGIKRFQLRHGLQTDGVIGKQTLYWLNQSPRQRAVLLARNELRQRI
FSRKLTPSYLLINVPAFEMKLVEQEQTVLTSKVIVGKSSRQTPILDSQISSIVLNPSWRV
PSSILRRDILPHIRKDGYYLQDREFDVYDYSGQLIFHTPEEWQELASSRFPYQLVQRPGP
KNALGKYKFHFDNSFSVYLHGTSEPALFKRENRALSSGCIRIEKVNELAQWFKRNLVKDK
GLWDRLAPNVTDPQWFALSEKLPVHLVYWTAWLDDKGQDHYRNDIYHLEAEFTNAVTSSI
FNIP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgcaaagttaccttggcttatcaagcacgggcggctatttaagattgtcgtt
tgcagcctgttatttttaggtatgttcgtaagcaatactcttagagcgacatcccccctt
gatagccgtattaatgttaattcctttcagcaatatcccttcctcttagaacagactctt
ttattcgatctagctggtgtaaatcccttatttaacaaaaattatcaggcattatcacag
gctaaaacagaaccggttcaacctgatgatatggttcgcatgcaagggcaggtgacggcc
tattggctgcatatttcagccttatcgggttgtgatgctgtaatgacaaacaatacaaac
gcggatccgatgagtgacatccattatcaggcagtgcttaaaaagatcagccaacttata
caacttgaatcccaattttcttgggaaaccttgatgttagaaaacaaactcaccgtcggt
caaactcatcctatagtcaacactattgccaaacgcctttggttattaggagatatgcca
aaagaagttgatgttgaacaagtctataccgatgagttgatgctaggtattaagcgtttt
caacttcgccatggtttacaaaccgacggggtgattggtaagcaaaccttatattggtta
aatcaatcacctagacaacgggctgtattactcgcaagaaatgaattaagacaaagaata
tttagtcgcaaattaacacccagttatctgttaattaatgtgccagcttttgagatgaaa
ctggttgaacaggaacaaacggtgttgacctctaaggtgattgtgggtaagtcttcacgg
caaaccccaatactggatagtcaaatatccagtattgtgcttaatcccagttggcgtgtg
cctagcagtattttacgacgggatattttacctcatatccgtaaagacggttattacctg
caagaccgtgaatttgatgtttatgattatagtgggcaattaatttttcatacgccggaa
gaatggcaggagcttgcctcttcccgtttcccttaccaattagtgcagcgtccaggccct
aaaaatgcgttaggtaaatataagtttcattttgataatagttttagcgtctatttacat
ggcacttctgaaccagctctatttaaaagggagaatagggcactttcatcgggctgtatc
cgtattgagaaagtcaatgagttagcacagtggttcaaacgtaatcttgttaaagataag
ggcttatgggataggcttgccccaaatgtgacggatccacaatggtttgcactgtcagag
aaattacccgtacatctggtttattggacggcatggcttgatgataaagggcaagatcat
tatcgcaatgatatttatcatttggaggccgagtttacaaatgctgttacaagctcaatt
tttaacattccctaa
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