Shewanella sp. JNE2: MZ182_10570
Help
Entry
MZ182_10570 CDS
T08546
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
shej
Shewanella sp. JNE2
Pathway
shej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MZ182_10570 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shej03400
]
MZ182_10570 (recC)
Enzymes [BR:
shej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MZ182_10570 (recC)
DNA repair and recombination proteins [BR:
shej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MZ182_10570 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UPO29502
LinkDB
All DBs
Position
2355833..2359513
Genome browser
AA seq
1226 aa
AA seq
DB search
MLKLIQSNQMEVLCAHLAAYLRQSVPNTRLLRSEHILVQSPGMSTWLRLEIAKQNGIAAA
LEFPLPSSFTWQLCHHLLPNVPKENAFTKAAMTWKLMQLLPRLLADDAFGPLRHYLGDLS
LHTLGNINGLDELAHQRPADDIKLYQLCGRIADIFDQYLVYRPDWMLAWEQNQHPTTLNK
PLNEDQRWQPILWRALVAFNRDELNQSHYHRANLHSALIEALNDPNTSLTPLPQRLFVFG
ISSMAPQTLEVLYHLASRIDVIILSLSPCQHYWGDIIDPRHRARMAVQYAGKRQLAEQWE
DKLEVGNPLLANNGKMGRELLDMLLELPAEHCDFGDDVYCEPCDDPNDPACHASMLHGVQ
YDILEMQTLDSVLGPDAALYQNIAARRILKKDDESILVKSCHSPLREVETLHDHLLDMLS
RHPQLSPKDIVVMMPDVAAYAPYIDAVFAAKQGLHYIPYAIADRGAAQESPLINSFLNLL
GINQSRFGLTDILSILEVPAILRRFQLDDDELQLIRRWLDEAGVRWGRDQQSRLKQGVPA
FEQNSWAFGIKRLILGYALSDDAPLYQDHLVVTGIEGQSAQALGKLLNFIEALDETQQIL
EKPQTGAVRLMELTTLLDAFYDTDEDEREQLQDIRDAIATLEQELLSAGKPIEALSTAQA
DIATSLTLSIEVLQQWFNQRLTESRVGQRYLAGSVNFCTLMPMRSIPFKLVCLLGMNDGV
YPRVQHPVGFDLMAHFGPRKGDRSRRLDDRYLFLEALLSAREQLYISYIGRSERDNSERI
ASMLVSELIEYCQLCYLPEDLSPQLATISNSEEVEKALLNEIVSQQPLQPFDPKLYQAET
AGTKGIKQSYSQQWCPPNTRTDNGRFIDEFTRIVVENEITQAAIIEEEHLDISALIRFFR
NPAQYFFNRTLKVDLSLNIQADDNDEPFSLNALERYMLQAQLLDNSISQGVLEPDIELLK
RLKASGNLPMHPFDDLLLRQYQQDIKPLIGRTLFLKGEQQSHHADIRLSFDLAISPTTQP
SQTRRVWLEGRIDDISPKGLINYRPGSAHGRDILRLYLRHLCLMAMGYDHASYLLDMGHF
HALSPITPEHAHQLLTDLLQLFYQGQQHPLCFMPRTALVYASSEGEHAERLNEARAEWLD
EQGEIGEGTEPHYQRLFQFPQDFTENTFGVLADRIYRPMVSLYVKDTLAQLEDFALNHGM
NLGSVNLDPAADINSVSTQQHISRGE
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagttaatccagtctaatcaaatggaagtactctgtgcccatttagccgcttac
cttcgccagagtgtccccaatacacgcctattacgcagtgagcatattctggtacaaagc
cccggtatgtcgacttggttacgtcttgaaattgcaaagcaaaatggtattgcagcagca
ctcgaatttcctctgccctccagttttacatggcagttgtgccaccatttattacctaat
gtcccgaaggaaaatgccttcactaaggctgcaatgacctggaaactcatgcagttattg
ccccgtctgttagcggatgatgcctttgggccacttaggcactatttaggtgatttaagt
ttacatacgttaggtaacataaatggattggatgaattggcgcatcagcgtcctgccgat
gatatcaagctgtatcagttgtgcggtcgtattgccgatattttcgatcaatatttagtg
tatcgccccgactggatgttagcttgggagcaaaaccagcaccctacaacgctcaacaaa
ccgctcaatgaagaccaacgctggcagcctattttatggcgcgccttagttgcctttaat
cgagatgaactcaatcaaagccattatcacagggcaaacctacacagcgcattgattgaa
gcgctcaatgatcccaatacctcactaaccccgttgcctcaacggctctttgtatttggt
atttcatcaatggcgcctcaaacccttgaagtgctttatcatttagcaagccgtatcgat
gtgattattttaagtttgagtccatgccagcattattggggtgatattatcgatccacgg
caccgtgcacgcatggcggtgcaatacgccggcaagcgccaattagcagagcaatgggag
gataaactcgaggttggtaatcctctgttggcaaacaatggcaagatggggcgtgagtta
ctcgatatgttgcttgagcttcccgccgagcattgtgattttggtgatgatgtttactgt
gaaccttgcgatgaccctaacgatcctgcctgtcacgccagtatgctccacggggtgcaa
tacgatattttagagatgcaaaccttagatagcgtacttgggcctgatgctgcgctttac
caaaatatcgcagcacgccgcatacttaaaaaagatgacgagtcaatactcgttaagagc
tgccatagcccactgcgagaagtcgagaccctacacgatcaccttctcgatatgttaagt
cgccatccccaattgtcccccaaagatattgtcgtgatgatgcccgatgtcgccgcctat
gcgccttatatcgatgctgtgttcgccgccaaacagggcctgcattatattccctatgcc
atcgcggatcgcggcgcggcacaagaatcacctcttattaatagttttttgaatttactt
gggattaatcaaagtcgtttcggcttgaccgatatcctcagcatcctcgaagtacccgcc
attttgcgccgttttcagcttgatgacgatgaattacaactgatccgccgctggcttgat
gaagctggcgttcgttgggggcgagatcaacaaagtcgcctaaaacaaggtgtacccgca
tttgagcaaaactcttgggcctttggcataaaacgactgatcttaggttatgccttaagt
gacgatgcgccgctctatcaagatcatttagtggttaccggcatagaaggacaatcggca
caagcactcggtaaactgctcaactttatcgaagcactcgatgaaacccaacaaatactc
gaaaagccccaaacgggcgccgtgcgtttaatggaattaacgacattattagatgccttt
tacgacacagatgaggacgagcgcgagcagttacaagatatccgcgatgccattgccacc
ctagaacaagagctattatccgcaggaaaaccgatcgaggcactatcaacagcccaagcc
gatatcgccacgtcgctaaccttaagcatcgaagtattacagcaatggtttaatcagcgt
ttaacggaatcccgcgttggtcaacgctatctcgcaggcagtgtcaacttttgtaccctt
atgcccatgcgttccattccctttaagcttgtctgtttgctcgggatgaatgacggggta
tatccaagagtgcaacacccagtcggttttgaccttatggcccactttgggccgcgtaaa
ggtgatcgctcccgccgtcttgatgatagatatctgtttttagaagccctactctcagcg
cgcgagcagttatatatcagctacattggtcgcagtgaaagggacaactcggagcgtatc
gcctcgatgcttgtttctgaactgattgaatattgtcagctttgttatctgcctgaagat
ctatcgccgcagcttgccactatcagtaacagtgaagaggtagaaaaagccctgctcaat
gagattgtcagtcaacagccattgcaaccctttgatcctaagttgtaccaagccgaaacg
gcgggcacaaaagggatcaagcaaagttacagccaacaatggtgtccacccaatactcga
acggataatggtcgttttatcgatgaattcactcggatagtggtcgagaatgaaatcaca
caggccgctattattgaagaagaacatctggatatttcagccttgatccgcttctttcgt
aatccggcacaatacttctttaaccgtacactcaaggttgatttaagccttaatattcaa
gctgatgacaatgacgaaccctttagcttgaatgcccttgaacgctatatgttacaagca
caactactcgacaatagcataagccaaggtgtgttagagccggacattgagcttttaaaa
cgcctaaaagccagtggtaacttgcccatgcatccctttgatgatctactgctacgccaa
tatcagcaggacattaaaccgcttattggcaggaccttattccttaaaggcgagcagcag
agccatcatgcagacattaggctcagcttcgatttagcgatttcacccacaactcagccc
agtcaaacgcgcagagtatggcttgaaggtcgcattgatgatattagccctaagggactc
atcaattaccgccccggcagtgcccatggccgtgatatattgaggctgtatttacgccac
ctgtgccttatggcgatggggtatgaccatgctagctatctattggatatgggacatttt
catgcgctttcgcccatcacgccagagcacgcccaccagctattgactgatttactgcaa
ctcttttatcaaggtcaacagcatcccctgtgttttatgccacgcaccgcccttgtttac
gcgagcagtgaaggcgaacatgctgaaagactcaatgaggcacgggctgaatggctagat
gaacaaggagaaataggtgaaggtacagagccccattatcagcggctattccaattccca
caggattttactgaaaacacctttggcgtactcgccgaccgtatttatcgccccatggtc
agtttatacgtgaaagacacgctggctcagcttgaggactttgccctcaatcatggcatg
aacctcggtagtgttaacttagatccagcggccgacatcaatagcgttagcacacaacag
catatctctcggggagaataa
DBGET
integrated database retrieval system
