Shewanella sp. JNE2: MZ182_10575
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Entry
MZ182_10575 CDS
T08546
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
shej
Shewanella sp. JNE2
Pathway
shej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MZ182_10575 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shej03400
]
MZ182_10575 (recB)
Enzymes [BR:
shej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MZ182_10575 (recB)
DNA repair and recombination proteins [BR:
shej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MZ182_10575 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
UPO33253
LinkDB
All DBs
Position
2359531..2363286
Genome browser
AA seq
1251 aa
AA seq
DB search
MLSTHTTTQTPTVQHQAEALNPLTLPFGGSRLIEASAGTGKTYTISGLYLRLLLGDGIDT
PLTCEQILVVTFTNAATEELRDRIRRRIQVAFKCFLGLPIEDPFVQALYDNTPVDERSIA
LRRFDLALKSLDEAAIFTIHGFCQRILSDLAFESSLLFESDFTLDDSEFLHHAVRDFWRE
ACYPLPDYLAQVIAKEFGEPDGLIKQLRPLLGASQAQPLSPTANFTTLAQSLCQSLERFK
LAWPRGRDGLLELLHSLPLNGTRFGKATEHYPKLAAMFDALDNWLAYGNGLPPIKVLEDL
SLSELKLNKGGVLPSVSEAPLLDHMEQLAALIKAVKPAFLYSAKQGISARFAKQKQQQNV
LTPDDLLTTLADALNANRQTLPKAVASRFPVALIDEFQDTDPLQFAIFSSIYQPHHAFNL
PTDNHLNHAEKNLSLLMIGDPKQAIYAFRGADIYTYIEARKATEAHYHLDTNYRSSTNMV
AGVNHLFSRHPDPFISQSIPFDSVKTPSSAKHKILTEPSENPAALRVRLLSETENGLNKT
TARHRLANDAAAEITRLLTSAAHGECYTPKGPLMAKDIAILVRDRNEAAVMKAALSQHQI
GAVFLSRDSVFDTLEAREMALILRSLANPKDERALRSALATALLGYNAEQIHAFNQNEEQ
RQQLLEQFFDLHTIWQKRGIMPALLSLANSTSLIERLLHAPQPKLDSNQEQEITYGERRL
TDFRHLAELLQQKATELDGISALLNWYEQQLIDNTGTDEQQLRLESEQNLVQIVTIHKSK
GLEYPVCFVPFVSLARDNRRRPTPMLYHKINQTHGQALVWDIEGTEEGWEQFRQETLAED
LRLLYVALTRPVYLCYLYIANHSRQLKNGLKSQLHETAIGYLLGITDADCDFNRISQAAQ
NLAQRIDAISIDKIPEETSLQTLPSSHDATQTLAPKTIHRQYSTPWRVGSYSGLVKNTSH
GKAAPGADDEALSVLEQGVASRDQLKTDNSLDPKPFGLNRFNFERGANAGSFMHLVLELI
DFTKAEFDLPEQLPKAMLQYGIAAEWVDVLHAWYLDILKAPLALMPAEAEATTPVINPKL
CLATLSKQDTLVEMEFYLPLNALKDTQLNALLNQFGYRSTLKFDDLQGMLKGFIDLTFEY
EGKFYIADYKSNHLGDDIYTYHQAALQGAIKEHHYDLQYILYSLALHRYLRLRLPAYDYD
THIGGCYYLFLRGMSAQYPGYGIYYDKPPKALIYALDALFDNPFIDTGVTV
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtacacacacgacaacccaaacgccaacagtacaacatcaggctgaggcactt
aacccactgacattgccctttggcggcagtcggctgatagaagccagcgcaggaacgggt
aaaacctatactatttcaggtctttatctgcgtttactcctaggtgatggcatcgatacc
cctttaacctgtgaacaaattttagtggtcacctttaccaatgccgcaactgaagaatta
agggatcgtattcgtcgccgcattcaagtcgcctttaagtgttttttaggcttgccgatt
gaggatccctttgtacaagcactttacgacaacacgcctgttgatgaacgctcaattgcc
cttaggcgtttcgatttagcactaaaatccctcgacgaagccgcgatttttactattcac
ggtttttgccagcgcattttgtcggatcttgcctttgaatcatccctgcttttcgagtca
gactttaccttagatgatagcgaattcctgcaccatgctgtgcgggatttttggcgtgag
gcttgttatcccttaccagactacttagcccaagttatcgcaaaagagtttggcgagccc
gacggtttaatcaaacaactgcggccattactgggggcgagccaagcgcaaccgcttagc
ccaacagcaaactttaccaccttagcgcaatccctctgccagagtttagaacgcttcaag
ttagcttggccacgtggccgtgatggattactcgagttactgcatagcctaccacttaat
ggcacgcgatttggtaaagcaacggagcattaccctaaactcgcggcgatgttcgatgcc
ttagataattggcttgcctatggaaatggtctaccgcccataaaagtattggaggattta
tccctatcggaacttaagctcaataaaggcggcgtgctcccaagtgtaagcgaagctcca
ctgcttgatcatatggagcaattggcggcactcattaaagccgttaaacccgcgtttttg
tatagtgctaaacaggggattagcgcgcgttttgcaaaacaaaaacaacaacaaaatgta
ttgacgcccgatgacctactaaccaccttggccgatgcattaaatgccaaccgtcagacc
ttacccaaagcggtagcaagtcggttccctgtggcattgattgatgagtttcaggacaca
gatcccctgcaatttgctattttctcaagcatttatcaaccccatcacgcattcaattta
ccaactgataatcaccttaatcatgctgaaaaaaacctcagtctattgatgattggcgat
cctaaacaggcgatttatgcttttcgtggcgccgatatctatacctatatcgaggctcgc
aaagccactgaagcccactaccacttagatacaaactaccgctcaagcaccaatatggtc
gctggcgttaaccatttatttagccgacatcccgatccttttatcagtcaatcgattccc
tttgacagcgtcaaaacccccagcagcgcgaagcataaaatcttaaccgagccaagtgaa
aatcccgctgcgctcagagtaagactgttaagtgaaaccgaaaatggcctaaataaaacc
acggcaaggcatcgactcgctaacgatgctgcggcagaaatcacccgtttgttaacgagt
gccgcccatggtgaatgctatacccctaaagggccattaatggctaaagacattgccata
ttagtgcgtgatcgtaacgaagccgcagtaatgaaagcggcactcagtcagcaccaaatc
ggtgccgtgtttttaagtcgcgacagtgtattcgatacccttgaagcgcgagaaatggcg
ttgatcctacgctcactggcaaaccccaaagatgagcgcgcactgcgaagcgccctcgcc
acggcattacttggttataacgcagaacaaattcatgcatttaaccaaaatgaagagcag
agacaacaactgttagaacagttttttgatttacacactatctggcaaaaacgcggcatc
atgccggcactgctcagtcttgccaatagtacgtcgcttatcgaacgtttgctgcacgca
cctcagcccaagttggatagcaatcaagaacaagaaataacatacggtgaacggcgcttg
accgactttcgtcatttagctgaactattacagcaaaaggccacggaactcgacgggata
agtgccctactcaattggtatgaacaacaacttattgataatacaggaacagatgaacaa
cagcttcgcctagaaagcgagcagaatttagtgcaaatcgtcactatccataaaagtaag
ggactcgaataccccgtttgtttcgtgccctttgtcagtctggcgcgggacaatcgccgt
cgcccaacacctatgctttaccacaaaataaaccagactcatgggcaagcgttagtgtgg
gatattgaaggaacagaggaaggctgggagcagtttaggcaagaaaccttggccgaagat
ctccggctattgtatgtggcactcactcggcctgtgtatctgtgttacttgtatatcgct
aaccacagccgtcaactcaaaaatggccttaaaagtcagctccatgaaaccgctattggc
tatcttctggggatcaccgatgccgattgtgattttaaccgtatcagccaagcagcacaa
aatcttgcccaacgtattgatgcgattagcattgataaaataccagaagaaactagcctg
caaacattgccatcaagccatgatgcaacgcaaacactcgcccccaaaacaatccatcgc
cagtacagtacaccttggcgagtcggcagttattctggtttagtgaaaaataccagccac
ggtaaagccgcgcccggtgccgatgatgaagcgctcagcgtcttagaacaaggtgttgca
tcacgcgaccaacttaaaaccgataacagcttagatcctaagccatttgggcttaatcgc
tttaactttgagcgcggtgcaaacgcggggagttttatgcacttagtgctcgagctaatt
gattttacaaaggcagagttcgatttacctgagcaacttcctaaagccatgctgcaatat
ggtatcgcagccgaatgggtagacgtcttgcatgcttggtatcttgatatcctcaaggca
ccccttgcactgatgcccgctgaagccgaagcgacgactccagttatcaatccaaagctg
tgtttggccacattatcaaaacaagataccttagttgaaatggagttttatttacccctt
aacgcgctaaaagatacacaacttaatgccttactgaatcaatttggttataggtcaacc
cttaaatttgatgatcttcaaggtatgctgaaaggttttattgacttaacctttgaatat
gaaggtaaattttacattgctgactataaatccaaccatctcggtgatgatatatatacc
taccatcaggcggctcttcagggagcaattaaagaacatcactatgatttacagtacatt
ctttattccctcgccctgcacagatacttacgattgcgcctgcccgcatatgattatgac
acccatatagggggttgttattatttgtttttaaggggaatgtctgctcaatatcctggc
tatggtatttattatgataaaccgcctaaggcactgatctatgcgctggatgctttattt
gataacccatttatcgacactggagttacggtatga
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