Shewanella sp. JNE2: MZ182_11180
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Entry
MZ182_11180 CDS
T08546
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
shej
Shewanella sp. JNE2
Pathway
shej00020
Citrate cycle (TCA cycle)
shej00480
Glutathione metabolism
shej00720
Other carbon fixation pathways
shej01100
Metabolic pathways
shej01110
Biosynthesis of secondary metabolites
shej01120
Microbial metabolism in diverse environments
shej01200
Carbon metabolism
shej01210
2-Oxocarboxylic acid metabolism
shej01230
Biosynthesis of amino acids
shej04146
Peroxisome
Module
shej_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shej_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MZ182_11180
09102 Energy metabolism
00720 Other carbon fixation pathways
MZ182_11180
09106 Metabolism of other amino acids
00480 Glutathione metabolism
MZ182_11180
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MZ182_11180
Enzymes [BR:
shej01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
MZ182_11180
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Gene cluster
GFIT
Motif
Pfam:
IDH
HTH_39
RodZ_C
Motif
Other DBs
NCBI-ProteinID:
UPO29620
LinkDB
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Position
complement(2497561..2499786)
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AA seq
741 aa
AA seq
DB search
MKDNSSTIIYTETDEAPALATLSLLPIIRTFTDAAGVAVETRDISLSGRIIASFPEQLTE
AQKIGDHLTELGELANQPEANIIKLPNISASIPQLKACILELQQKGYDIPNYPDEPKTDA
EKSIKTRYDKIKGSAVNPVLREGNSDRRAPLSVKNFAKKNPHSMGKWAKDSKSHVAHMTD
GDFYGSEQSVTLSDAGSVNIVLTQKDGQEVVLKSGLKLLAGEIIDAAVLSKKALVSFYER
EIENAKAEDVLLSLHLKATMMKVSDPIMFGHAVKVFFKPVFDKHAALFAELGVDVNNGFG
DVYAKIATLPADTRAEVEADIAAVYAARPALAMVDSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGQLHDTKAMIPDRCYAGIYQETIAFCKEHGAFDPKTMGSVPNVGLMAQKAE
EYGSHDKTFEIPADGVVNVVDASGKVLMSHNVEAGDIWRMCQVKDAPIRDWVKLAVRRAR
LSNTPAVFWLDSKRAHDAQIIAKVQQYLPEHDTDGLEISIMSPEEATRFSLARIKEGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLEKEGH
LRWDSLGEFLALAASLEHLSQTVGNPKAQVLADTLDQAIGQFLDSNKSPSRRVGELDNRG
SHFYLAMYWAQALAAQTGDEQLQAHFIPLAHALAANEPVIVAELANAQGAPVDLGGYYRL
DAAKAEKAMRPSETLNKLLIA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataactcatcaacaattatttacactgaaacagatgaagcgccagcactggcc
accctctcactcttacctattatcagaacgtttaccgacgccgcgggtgttgcggttgaa
acccgtgatatctcgttatcgggccgtattattgccagtttccctgagcaactgaccgaa
gcacaaaagattggcgaccatctgacagagcttggcgagttagcgaatcagccagaagcg
aacatcatcaagttaccgaatatcagtgcttcaattccacaattaaaagcctgtatcctt
gaactgcaacaaaaaggttacgacattcctaattatccggatgagccaaaaaccgacgct
gaaaagtcaattaaaacccgttacgacaagatcaaaggcagtgcggtaaacccagtactg
cgtgaaggtaactcagatcgccgcgccccattatcggtgaaaaacttcgccaagaaaaac
ccgcattccatggggaaatgggccaaagattccaagtcacatgtggctcacatgactgac
ggcgatttctacggcagcgagcagtctgtcactttatctgatgcgggcagcgtgaatatc
gtgctgacccaaaaagatggtcaagaagtggtgctcaagtcgggtcttaagctgctggct
ggcgaaattatcgatgctgcggtattgagtaaaaaagccttagtgagcttctatgagcgt
gaaatcgaaaacgctaaagctgaagatgtgctgttatcgctgcatctcaaagccactatg
atgaaagtgtctgatcctattatgtttggtcacgcagtgaaggtattctttaagccagta
tttgacaaacatgcggcgcttttcgctgaattaggcgtagatgttaacaacggttttggg
gatgtttatgccaaaatcgcgactttgccagcagatacccgtgcagaagtcgaagccgat
atcgccgccgtttatgctgcacgccctgcattggctatggtcgattctgataaaggtatc
accaatttacacgtgccaagcgacatcattatcgatgcgtctatgcctgctgcgattcgt
tcatctggccaaatgtggggaccagacggtcaactgcatgacactaaagccatgatccca
gatcgttgctatgccggtatctaccaagaaacgattgctttttgtaaagagcacggcgct
ttcgatcctaaaaccatgggcagtgtgcccaacgtgggcttgatggcgcaaaaagcggaa
gaatatggtagccacgacaagacgtttgaaattcctgctgacggtgtggtcaacgttgtt
gatgccagcggtaaggtattgatgagccataacgtggaagcgggcgatatctggagaatg
tgtcaagttaaagacgcacctatccgtgattgggtcaaactggccgtgcgccgtgcccgt
ttaagcaatactcctgcggtattttggttagatagcaaacgtgcccacgatgcacaaatc
attgctaaagtgcagcagtatctgccagagcatgatactgatggcttagagatcagcatt
atgtctcctgaagaggcaacgcgtttctctttggctcgcatcaaagaaggcaaagatacg
atttcagttacgggtaacgttttacgtgactacctgactgacttgttccccatccttgag
ctaggcaccagtgccaaaatgctgtcaatcgttccattaatgaacggcggcggtttattt
gaaacaggtgcgggcggtagtgcacctaaacacgtgcaacagcttgagaaagaaggtcac
ttacgttgggattcgctcggtgaattcttggctctggcggcgtctcttgagcatttaagt
caaaccgtaggcaatccaaaagcgcaagtgcttgcagataccttagatcaagccataggc
caattcttagatagcaacaaatcgccatcaagaagagtcggtgagctggataaccgtggc
agccatttctacttagccatgtactgggcacaagccttagcagcgcaaacgggcgatgag
caactacaagctcactttattcctttggctcatgcgctggctgcgaatgagccagtcatt
gtggctgaattagcaaatgcacaaggtgcgcctgtcgatttaggcggttattaccgttta
gatgcggctaaggctgaaaaagccatgcgcccaagcgagacgttaaacaaactgttgatt
gcttaa
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