Shewanella sp. JNE2: MZ182_14480
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Entry
MZ182_14480 CDS
T08546
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shej03016
]
MZ182_14480
Enzymes [BR:
shej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MZ182_14480
Transfer RNA biogenesis [BR:
shej03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MZ182_14480
Prokaryotic type
MZ182_14480
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GST_C_4
Motif
Other DBs
NCBI-ProteinID:
UPO30201
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All DBs
Position
complement(3227339..3228421)
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AA seq
360 aa
AA seq
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MSELHYLYGKPLGTADLRTQNSDFIVKEILPFSPTGEGEHHLLHIRKDGLNTVQVAEMIA
KFAKVHPKEVTYAGQKDKNAITEQWFGVRIPGKETPAWAELNSERLTLLSSSRHSKKLRI
GALLGNRFILTLRNVTHAEDIISRIEKVSQIGVPNYFGEQRFGHDGKNLVMGRQMLAGKK
VKDRNKRSMYLSAVRSNLFNTVVSYRLANHGTKPLAGDCVMLAGSKSFFVTPEWDLVVLK
RLIEKDIQLSAPLWGRGMMLPQGEAAAMETLAMSELSDDCYGLEHAGLEQERRPLLLEPQ
GLKYEITEDSLVLEFILPAGSFATSLLRELVDYQDVKEQQWQATVTSEANAVNGSDDAAS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactgcattacttatatggcaaaccactcggcactgccgatttacgtactcaa
aatagcgattttatcgtgaaagagattttgccctttagcccaacaggagaaggggaacat
catctcttacatatccgtaaagacgggctgaatacggttcaagtggcagaaatgattgcc
aagtttgcaaaggtgcatccaaaggaagtgacctatgcgggccagaaagataaaaatgcc
attactgaacaatggtttggtgtacgcattccgggtaaagaaactcccgcttgggcagaa
cttaacagtgaacgattaacgcttctctctagtagtcgccatagcaaaaaattacgcatc
ggtgcactactgggtaatcgctttattttgactttgcgtaatgtcactcacgctgaagat
atcattagccggattgagaaagtgagtcaaatcggtgtccccaattattttggtgagcag
cgttttggccatgatggtaaaaatctcgtcatgggacgccaaatgttggcgggtaaaaaa
gtgaaagacagaaacaaacgcagcatgtatttatctgctgtgcgctcaaacttgtttaat
accgtcgtgtcataccgcttagccaaccatggtactaaacctttagcgggtgattgtgtg
atgttggcgggtagcaaaagtttcttcgtgacacccgaatgggatctggtggtgttgaaa
cgtctgattgaaaaagatattcaactatcagcacctttgtggggtcgtggcatgatgttg
cctcaaggcgaagccgcggcgatggaaaccttagcgatgagtgagcttagcgatgactgc
tatggtttggaacatgcaggattggagcaggaacgtcgtccattactgcttgagcctcaa
gggcttaaatacgaaataacagaagatagtttagtgttagagtttattttacccgcgggt
agctttgcgacatctctacttagggaactggttgattatcaggatgtaaaagagcagcag
tggcaagcaacagttacgtcagaggctaacgctgttaacggtagtgatgacgctgcatca
tga
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