Shewanella sp. JNE2: MZ182_14775
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Entry
MZ182_14775 CDS
T08546
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shej03400
]
MZ182_14775 (radA)
DNA repair and recombination proteins [BR:
shej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MZ182_14775 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
AAA_22
GvpD_P-loop
SLFN-g3_helicase
AAA_16
AAA
ABC_tran
RecA_N
nSTAND_NTPase5
Zeta_toxin
zf-LYAR
nSTAND3
AAA_24
NTPase_1
AAA_29
AAA_14
cobW
KdpD
Viral_helicase1
DZR
Motif
Other DBs
NCBI-ProteinID:
UPO30256
LinkDB
All DBs
Position
complement(3299068..3300432)
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AA seq
454 aa
AA seq
DB search
MAKNKTAYVCNECGQDFPRWQGQCSACQEWNTITEVRLGAASPGRGTKFAGYAGASSSEV
KTLDQIDLNALPRILSHFGELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCYLAEQM
PALYVTGEESLQQVAMRAHRLGLPTNKLRMLSETSVEQICEVALKELPKVIVVDSIQVMH
MSDVASSPGSVSQVRESASYLTRFAKQNGIAVIMVGHVTKDGSLAGPKVLEHCIDCSVMF
EGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEESSGSLVMVV
WEGTRPLLVELQVLVDNSAMSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVFVNVV
GGVKVTETSADLTLLLAMVSSFRGEILPSDLVAFGEVGLSGEIRPVPNGQERLIEAAKHG
FKRAIVPKANVPKKPPIGMEVIGVSKLSEALEAI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaataaaactgcgtacgtgtgtaatgagtgtgggcaagactttcctcgttgg
caaggccaatgtagcgcctgccaagaatggaatacgattaccgaagttagactcggtgct
gcttcgcctgggcgagggactaagtttgcaggttatgcaggggcaagtagtagtgaagtc
aaaaccttagatcaaatcgatttgaatgcgttaccgcgaattttgagtcactttggagaa
ctcgaccgagtgctggggggcgggattgtcccaggttcagcgattcttatcggtggtcac
cctggagccggtaaaagtaccctgttgttgcaaacgctctgttatttggctgaacaaatg
ccggcattatacgtaacgggtgaagagtctttacagcaggttgccatgcgcgcccatcgt
ttgggtttaccgaccaataaattacggatgttatcggaaaccagtgtcgagcaaatttgt
gaggttgccctaaaagaattacctaaggtgattgtggttgattcgattcaggtcatgcat
atgagtgatgtggcatcaagtcctggcagtgtgtcgcaggtacgagagtctgcttcttat
ttgacgcgttttgcgaaacaaaatggtatagccgtgattatggtgggccatgtcactaag
gacggtagccttgctggccctaaggtgcttgagcattgtattgattgttcagtgatgttt
gagggggatagtgacagtcgttaccgtaccttgcgttcccacaaaaaccgtttcggtgca
atcaatgagttaggtgtatttgccatgacagagcgcggcttaaaagaagtcgctaatcct
tcagctatcttcctttcccgtggtgaagaggaatcgtctggttctttagtgatggtggtg
tgggaaggtacacgaccgctgttagtagaactgcaagtgctggtggataactcggctatg
tctaatccgcgccgcgtggctgttgggatggatgcaaaccgtttagccatgttactggcg
gttatgcatcgccatggcggtttgcaaatgtcggatcaggatgtgtttgttaacgtagtc
ggcggcgttaaagtgacggaaaccagtgcggacttaaccctattactggcaatggtatcg
agttttcgtggcgagattttacccagtgatttggtcgcatttggtgaagtcgggttatcg
ggcgaaattcggccagtgccaaatggacaagagcgattaatcgaagcggctaaacatggc
tttaaacgagcgatagtccctaaggctaatgtgcctaaaaagcctcctatagggatggaa
gttatcggtgtttcaaaactatcagaagccttagaggcgatttag
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