KEGG   Shewanella sp. JNE2: MZ182_15265
Entry
MZ182_15265       CDS       T08546                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
shej  Shewanella sp. JNE2
Pathway
shej03030  DNA replication
shej03430  Mismatch repair
shej03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shej00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MZ182_15265
   03430 Mismatch repair
    MZ182_15265
   03440 Homologous recombination
    MZ182_15265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shej03032]
    MZ182_15265
   03400 DNA repair and recombination proteins [BR:shej03400]
    MZ182_15265
Enzymes [BR:shej01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MZ182_15265
DNA replication proteins [BR:shej03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MZ182_15265
DNA repair and recombination proteins [BR:shej03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MZ182_15265
SSDB
Motif
Pfam: RNase_T Adeno_E4_34
Other DBs
NCBI-ProteinID: UPO30346
LinkDB
Position
complement(3408312..3409217)
AA seq 301 aa
MTRAPAPFPIERLADIPERPEDFRLLERIPLTREPQSWPLELSPMVGDEQPMVLLDTETT
GLSADDESIIELGMVKVLYSPSAKRIVSIVDVISLYEDPGKPIPELITELTGITDEMVQG
QHIDDSLVAGWLSDDPLVVAHNAQFDRPFFEKRFAALGHLSWACSANGIDWKALGFESRK
LEYLLLRLGWFYEGHRAATDCLAMAWLFHLLPESVANLLSEADRRTVLVRAFGAPFDVKD
YLKERGYRWHDGVKGANKHWWREISEDELPQEQTYLDDLYHRGSEHAHYEYKDARNRFKA
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacaagagcccctgcgccatttccgatagagcgcctcgcggatatcccagaaagacca
gaagattttagattgctggagcgtattccattaacgcgtgagccgcagtcctggccactt
gaactttctcctatggtcggtgatgaacagccgatggtgctgctcgatacagagacaacc
ggactgtctgccgatgatgagtccattattgagcttggaatggttaaggtgctttacagc
ccctcggctaagcggattgtgtcgattgttgatgtgatcagcctgtatgaagatcccggc
aagcctatccctgagctgattaccgagttaaccggtattaccgatgagatggtgcaaggc
cagcacattgatgattcactggtagcgggttggttatccgatgatccgctggtggttgca
cacaatgcacagtttgatcgtcctttctttgaaaagcggtttgccgcattaggccatcta
tcttgggcctgttcagccaatggcatagattggaaagcattgggttttgaaagtcgaaag
cttgagtacctactgcttcgcttaggttggttctatgaaggacacagagctgcaactgat
tgtttggcgatggcctggttgtttcatttgttgcctgagtccgttgcaaacttgttgtct
gaggcagacaggcgaactgtgttagttcgtgcgtttggtgcgccgtttgacgtaaaggac
tatttaaaagagcgtggttaccgctggcatgacggtgttaaaggtgccaacaaacattgg
tggcgcgaaatcagcgaagacgagttgccgcaggaacaaacttacctggatgatttgtat
catcgtggctcagagcatgcccactatgaatacaaagatgcccgcaatcgatttaaagct
ttgtag

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