Shewanella sp. JNE2: MZ182_15335
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Entry
MZ182_15335 CDS
T08546
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shej03016
]
MZ182_15335 (truB)
Enzymes [BR:
shej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MZ182_15335 (truB)
Transfer RNA biogenesis [BR:
shej03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MZ182_15335 (truB)
Prokaryotic type
MZ182_15335 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UPO30358
LinkDB
All DBs
Position
complement(3424120..3425076)
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AA seq
318 aa
AA seq
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MARRPKGRFIDGIVLLDKSTGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE
ATKFSQHLLDADKRYLVTAKLGERTDTSDSDGEVVQTRPVTFTEAQLLSALEHFRGDTQQ
VPSMYSALKYQGQPLYKYAREGIEVPRESRPITVFELNFISLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAQYPYAKMVTLEQLEALVTQAHEQQIDPSVLLDPLL
LPMDTAVADFPEVNVPEASAAYLMQGQAVRVTGLKADTLVRITLGDAHRFVGIGAMNDDG
LLAPKRLIVIHDEPIVTD
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtccgaaaggccgttttatcgatgggatagtgttactggataaatccact
ggcatgagttctaactttgccttgcaaagggtaaagcgcttttttaatgcgaataaagct
gggcatacgggcgcactcgatccgttagcgacaggtatgttacctgtgtgcctaggtgaa
gcgactaagttttcccagcacttattagatgctgataaacgttacttagtgacagcaaaa
ctgggcgagcgtaccgataccagtgattcagatggtgaagtggttcagacgcgcccagtt
acatttactgaggcgcaactactgagtgcgcttgagcactttcgtggtgacactcagcaa
gtgccttctatgtattccgcgctgaaatatcaggggcagcctctgtataaatatgcgcgt
gaaggcatagaagtgccgcgagaatctcgccctattacggtatttgagcttaatttcatc
agtcttgaaggtgatgagttgaccttagacattcattgctctaaagggacttatattcgc
accatcattgatgatcttggtgaaatgttaggttgtggcgcccatgtgattatgttgcga
cgaactcaagttgcacagtatccctatgccaaaatggttacactagaacagctcgaagca
cttgtcacccaagcacatgaacaacagatagatccgagtgtattactcgatcctctctta
ttacccatggatacggcagtggctgactttcctgaggtcaatgtgcctgaagcgagtgcg
gcttatttgatgcaaggccaagcggtacgtgtgacaggtctaaaagctgacacattagtg
cgtatcaccttaggggatgcgcatcgattcgttggtattggtgcaatgaatgatgatggc
cttttggcgccgaaacggctcatagtgatccatgacgagccgatagtcacagattaa
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