Shewanella sp. JNE2: MZ182_16300
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Entry
MZ182_16300 CDS
T08546
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shej
Shewanella sp. JNE2
Pathway
shej00630
Glyoxylate and dicarboxylate metabolism
shej00680
Methane metabolism
shej01100
Metabolic pathways
shej01120
Microbial metabolism in diverse environments
shej01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MZ182_16300 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
MZ182_16300 (fdhF)
Enzymes [BR:
shej01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
MZ182_16300 (fdhF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
NAD_binding_8
Fer4_7
DAO
HI0933_like
Fer4
Fer4_6
NAD_binding_7
Fer4_8
GIDA
Thi4
FAD_oxidored
Fer4_9
Amino_oxidase
FAD_binding_3
FAD_binding_2
Fer4_2
Fer4_22
AlaDh_PNT_C
Fer4_10
Fer4_21
Fer4_18
Lys_Orn_oxgnase
Shikimate_DH
Fer4_16
Fer4_4
Fer4_15
Fer4_Nqo3
Motif
Other DBs
NCBI-ProteinID:
UPO30526
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All DBs
Position
3632327..3636601
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AA seq
1424 aa
AA seq
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MIELQIDDQVLLVNPNNTLLQAAHNAGITIPSLCDQNAASQQLVTDKHNQKHDDKQACNL
CVVQIENADASLRCVRACETPVEMGMRVITQSAYLSKKRKQALNNILSDHFADCEAPCQQ
ACPAGVDVQSYLYHIAQGNHTQAIKVIKQTLPLPLSIGRVCPAFCEAECRRGSVDEPIAI
RQLKRHAADLDLAEGENGGMSYVPERQAETGKRVAIIGAGPAGLSAGYYLSNQGHSVEIF
EAMPQAGGWLRYGIPEYRLPKAILDKEIDLLCRNGLMIHTQTRLGHEVHLTQLAKDFDAI
CLAIGAQKAVPMDYPGSTLKGCYLGVDYLKDHCLEKSLPLGKKVAVIGGGNTAIDCARTA
VREGCDVTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPIENHSDADGHVCAVTFAKM
ALGEADASGRRAPINTGETFTQDFDTVIAAVSQTPDMSFLQDPASHLSQGEIALSRWNTF
IGCEHTMSAGIEKLFVIGDSRRGPATAVAAIGDGHKAAQAIDKMLKQGLSCELYSGEFSS
SKAVSHNSKQDQIAQDLYPNIQRQARLKMPELTAVQRLLNYSEVELGFAPDAAMQEAARC
LECACQANTNCKLRDYATDYKVESKQLNTDFARQFVVDKSSPFIQFDANRCISCGKCVDA
CNQQSGHCVIQFAYDSYQALPQTEDLTQERRAPRVGFSASMADSQCVQCGNCVQVCPTGA
LVDARDKRQGDKTSLKTASTICTYCGVGCRLDLKIDENTHRIRHIEGNKDSVVNQGMLCV
KGRFGFDFIHSEKRLTTPLIRKNGQLQPCSWQEAIDYIAKKLTDIKQQYGSNALASLASA
KATNEDNFVLQKFVRSVLGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPSIQDSDVI
FILGSDTTSAHPIIASKIKQAVTLHGARLIVADPKRVAIADNAELYVAQRPGTDVMLLNA
IMAEIIRNEWHDKTYIAERTEGVDALYAELAKDDYSLENAALITGVNASEIAQLARIIGT
AEKTAIYYAMGITQHTTGHDNVTAISNLQLLCGNIGIKGAGINPLRGQSNVQGACDMGAL
PNYFTGYQKVTDIHAKMRFEAYWQTPLSGEIGVTATHMMHDISKGKIKALYVMGENPVLS
DPDQAHVLRALNQIDFLVVQDIFLTETAELAHVVLPAASFVEKRGHFTNTERRVQRLEQA
MPAPGVALPDWQIVQKIANAMGANWNYIHEEDIWHEINELTPQYRGIRWQRLSQQDNGDF
PQGIQWPCPDEDHPGTPIMHQNQFTRGLGKFTPVSYRLPAEMPCSEYPLTLSTGRLLEQF
HTGTLTRKTPGLDLLGSPKVMISVYDAERLGISNGDKIKLTTRRGEIEIDAFVTKRAQVG
VLFLPFHFVEAAANKLTINALDPVAYIPEYKVCAVKAEKVTSCG
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttcaaattgatgaccaagtgctgttggttaacccaaacaacacactactg
caagcagcacataatgcagggataaccatccccagcctatgcgatcaaaacgcggcctca
cagcaattagttacagataaacacaatcaaaaacatgatgataaacaagcctgtaactta
tgcgtggttcaaattgaaaatgccgatgcaagccttcgttgcgtacgggcttgtgaaaca
cccgttgagatgggaatgcgggtaatcactcaatcagcctaccttagtaaaaagcgtaag
caagcactcaacaatatcctaagcgaccactttgccgattgtgaggcaccgtgccagcag
gcctgcccagcgggtgtcgatgtgcagagctatttatatcacattgcccaaggtaaccat
acgcaagccattaaagttattaaacaaaccttgccattacccttatctattggccgtgtc
tgcccagcattctgcgaggccgaatgtcggcgaggaagtgtcgatgaacctatcgccatt
cgccaattaaaacgtcacgctgccgatttagatttagcagaaggtgaaaatggtggtatg
agttacgtccctgaacgccaagctgaaacgggtaaaagggtcgccattatcggagcgggt
cctgcgggattaagtgctggatactatttatcaaatcaagggcatagcgttgagatattt
gaagcaatgccccaagcgggcggctggctacgttacggtattcctgaataccgtttaccc
aaagcgatattagacaaagaaatagacttactttgccgtaacggattaatgatacacact
caaacccgcttagggcatgaggtacatctaacccaattagctaaagattttgatgccatc
tgccttgctattggcgcccaaaaagccgtgccgatggattatcccggtagtacgcttaag
ggatgttatttaggcgtggattatttaaaagaccattgcctcgaaaaatcgttaccacta
ggcaaaaaagtagccgtcattggtggaggaaataccgctatcgattgcgctcgcactgca
gtacgtgaaggctgcgatgtcactttaatctatcgtcgtacccgtgctgaaatgcctgca
gaagcctatgaagtccatgaagctgaagttgaaggggtcaaatttcacttcttaacgaat
ccgattgaaaaccatagtgatgcagatggccatgtctgcgcggtcacctttgctaaaatg
gcacttggtgaagccgatgcttcaggcaggcgagcaccgattaatacgggggaaaccttt
acccaagactttgatactgtgatagccgcggtatcacaaaccccagatatgagttttctg
caggatcctgcgagtcatttaagccaaggagaaattgctcttagccgttggaataccttt
atcggctgtgaacacactatgtccgcgggtattgaaaaactgtttgtgattggcgattct
cgccgaggcccagccaccgctgttgccgccattggtgatggacacaaagcggcacaagcc
attgataaaatgttgaaacaagggctaagctgcgaactgtatagcggtgaatttagttca
tctaaagcggttagtcacaatagtaaacaagatcaaatagcacaggatctttatcctaat
attcagcgtcaggcacgcttaaaaatgcccgagttaaccgctgtacaacggctcctgaat
tacagtgaggtagaactaggattcgcacctgatgcggccatgcaagaggcggcacgctgt
ttagaatgtgcctgtcaggccaatacaaattgcaaactaagagattatgcgactgactac
aaagttgaatcaaaacaactaaacaccgattttgctcgtcaatttgtggttgataaatca
agcccttttatccaatttgatgccaatcgctgtatcagttgcggtaaatgtgtggatgcg
tgcaaccaacaaagtgggcactgcgtcattcaatttgcctatgattcttaccaagcactc
ccccaaacggaagatctgacccaagaacgccgcgcccccagagtcggctttagtgcatcc
atggcggatagccaatgtgttcaatgtggtaattgcgtccaagtttgccctacaggtgcc
ttagttgacgcccgagacaaacgccaaggggataagacatcactcaaaaccgcttccact
atctgtacttactgtggtgttggatgcagactcgacctcaaaatcgatgaaaatacccat
cgcatccgtcatatcgaaggtaataaggactctgtcgttaaccaaggtatgttgtgtgtt
aaaggccgttttggtttcgattttattcacagcgaaaaacgcctgaccactccactcatc
cgtaaaaacggacaacttcagccttgttcttggcaggaggctattgactatatcgccaaa
aagttgaccgatataaagcaacaatatggcagcaatgcgctggccagtctcgcctccgcg
aaggccacaaacgaagataattttgtactgcaaaagtttgtccgtagtgtacttggcacc
aacaatatcgaccactgcgcccgcctgtgccactcatcaaccgtcacaggcctgcaacaa
agtattggcagcggcgcgatgaccaatgatattccgagcatccaagactctgatgtcatt
tttattttaggttcagataccaccagcgcgcaccccattattgcgtccaagataaagcag
gcggtgacattacatggggcaagattaatcgttgccgatcctaaacgtgtcgctattgcc
gataacgctgaactctatgtcgcccaaaggcccggcacggatgtgatgctactcaatgct
attatggcggaaatcattcgtaacgaatggcatgataaaacctatattgccgagcgcaca
gaaggtgtggacgcactatacgcggagcttgctaaggatgattactccctagaaaacgcc
gcacttatcactggcgttaatgcaagtgaaattgcccaactcgcacgcatcatcggcacc
gctgaaaaaacagctatttactatgcaatggggatcactcagcacaccacagggcatgac
aatgttaccgctatttctaacctgcaactcttgtgtggcaatataggtatcaaaggggcg
gggattaaccccctacgtggccaaagtaatgtgcagggtgcttgtgatatgggcgcacta
cctaactattttactggctatcaaaaagtgaccgatattcatgccaaaatgcgctttgag
gcctattggcaaactccgctctctggtgagattggtgttacagcaacccatatgatgcat
gatatttccaaagggaaaatcaaggcgttatatgtaatgggggaaaatccagtattaagc
gacccagatcaagcccatgtgctaagagcgcttaaccaaatagattttctcgtggtgcag
gatatctttctaactgaaaccgcagaactagctcatgtcgtattgccagccgcctctttt
gtggaaaaacgcggtcactttactaacacagaacgacgggttcagcggcttgagcaagct
atgcccgcaccaggggtagcattgcctgattggcagattgtgcagaaaattgctaacgcg
atgggcgcgaattggaattacatccacgaagaagatatatggcatgaaattaatgaatta
acaccacagtatcgtggtattcgttggcaacgattaagtcagcaggataatggtgacttt
cctcaaggtattcaatggccctgtccagatgaagaccatcccggaacccccattatgcac
caaaaccaatttacacgcggcttaggcaaatttacgcctgtcagttaccgcttacccgcc
gaaatgccctgtagtgaatatccactaacgctttcaactggacgattattggagcaattc
catacaggtacattaacgcgtaaaacaccaggactcgatttactcggctcacctaaggtg
atgatttccgtctacgatgccgagaggctcgggattagtaatggcgataaaattaaactc
acgacacgccgtggtgagattgaaattgatgcctttgtgactaaacgcgcccaagtgggg
gtgttattcctccccttccattttgtcgaagcggcagccaataagctcaccatcaatgcc
cttgatcctgttgcttatattcccgaatataaagtgtgtgcagtcaaagcagaaaaggta
acgagttgcggctaa
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