Shewanella sp. JNE2: MZ182_16475
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Entry
MZ182_16475 CDS
T08546
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shej03000
]
MZ182_16475
Transcription factors [BR:
shej03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MZ182_16475
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
Motif
Other DBs
NCBI-ProteinID:
UPO30560
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Position
complement(3681182..3682177)
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AA seq
331 aa
AA seq
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MEKHSSLTPFKLRHLSFRLLQVYVQVVRLGNISAAARVLHLTQPTVSLQLKKLADVLGEP
LLESRDGRMLPTLVGNELYRAACDTLSRFEDVEAFMQQAKGGSVGHINIGIVTTAKYVLP
RILGAFYRQFPQVKVTLNIGNRAHVLGRFERQEDDLYLFSHPPSGDNVLSARIIKNPLQL
IVPKDHWAVGREQVNFNELKHERFIVREPGSATRLMFESWCSAQGITLSDTMQIESNEAI
RLSVASGLGLSVISAHTLQEGREKPAVLPVIGFPLESNWYLVGRKDRRLPYAAMQLVDFM
AAHLAECIEPEWVATDIQQLSMHFNPASLSR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcattcgtcattgaccccatttaaattgcggcacttaagttttcgtttattg
caggtctatgtgcaggttgttcggcttggcaatatttccgcagcagcaagggttttacat
ttaactcagccgacagtgtcattgcaacttaagaaactggccgatgtgttgggcgagcca
ttactggagagccgtgatggccgcatgttgcctactttggtaggtaatgaactttaccgc
gccgcctgcgataccttaagtcgttttgaggatgttgaagcctttatgcagcaggctaaa
ggtggcagcgttggtcatatcaatattggcatagtcaccactgcaaaatacgtattacca
cggattttaggtgcattttatcggcaatttccacaggttaaagtgaccttaaatattggt
aatcgtgcccatgtgttaggccgatttgaacgccaagaagatgatttatatctgtttagc
catccaccaagtggtgataatgtgttatccgcgcgcatcattaaaaacccactgcaattg
attgtgcctaaagatcactgggcggtgggccgcgagcaagtgaattttaatgagcttaaa
catgagcgttttatcgtgcgcgaaccaggctcagccacgcgcttgatgtttgagtcttgg
tgtagtgctcaaggcataaccctaagcgatacgatgcaaattgagagcaatgaagccatc
cgtttgagcgttgcgtcgggtttaggattatccgtcatatcagcacacacactgcaagaa
gggcgtgaaaaaccagcggttttgcctgttattggttttcctcttgaaagtaattggtat
ctggttggtcgtaaagatcgccgcttaccctatgcggccatgcagttagtggattttatg
gcagcgcacttggccgaatgtattgaaccagagtgggttgctacggatatccagcagctt
agcatgcattttaatcctgcaagtctatctaggtag
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