Shewanella sp. JNE2: MZ182_16720
Help
Entry
MZ182_16720 CDS
T08546
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
shej
Shewanella sp. JNE2
Pathway
shej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MZ182_16720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shej03019
]
MZ182_16720
Enzymes [BR:
shej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MZ182_16720
Messenger RNA biogenesis [BR:
shej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MZ182_16720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UPO30605
LinkDB
All DBs
Position
3738652..3740136
Genome browser
AA seq
494 aa
AA seq
DB search
MIAARFFNHITDHISRCPIFRRISQFCKQLFEDAPKTTAPTPAQIQSQASEASSNALSLE
LVPRDAHSISRKQISENALKVLYRLNKSGFKAYLVGGGVRDLLLGLEPKDFDVVTNATPE
EIKKLFRNCRVVGRRFRLAHIVFGRDVIEVATFRGHHGESNEKISKANAEGRLLRDNVYG
EIDEDAERRDFTVNALYYDISDYSIRSYGGGMADLKAGTLRLIGDPETRYREDPVRMLRA
VRFATKLSMNIEDVTAKPIKQLAPLLTDIPAARMYEEVLKLFFAGKALANFEMMQEYKLF
APLFPQVDALLKEDPKGPAMKMVQAIMKSTDLRVNEDKPVTPSFFYAAMLWYPLRQRAED
IAVESGLTLYDAFFAAMGDVMEQQCQTISIPRRFSTPSKDIWQLQLRFDRSQGTRAFKLM
EHPKFRAAYDLLLLRGEVEGGNVAKSAAWWQQFVEADETERLTIARSGNKSSGNRNAPQR
RRRRPSTTKAKAAE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatagccgccagattttttaatcacataacagatcacatttcgaggtgtcccattttt
cgccgtatcagccaattctgcaagcagctatttgaagacgcgcctaaaacgaccgctcca
actccagctcagatccaatctcaagcgtcagaagcttcttctaacgccttaagcctagag
ttagtgcccagagatgcccactccatctcgcgcaagcaaattagcgaaaatgcccttaag
gtattatacagactgaataaatcaggatttaaagcctatttggtcggcggcggtgtgcgt
gatttactcctcggactcgagcctaaagatttcgacgttgttactaacgcaaccccagaa
gaaatcaaaaaactgttccgcaattgccgagtcgtcggccgccgtttccgtctcgcccat
atcgtctttggtcgggatgtgattgaagtcgccacctttcgtggtcaccatggcgaaagc
aatgaaaaaatttccaaagccaacgcagaaggccgcttactgcgcgataacgtctatggc
gaaatagatgaagatgccgagcgccgcgactttactgtcaatgccctctattacgatatc
agcgattattctatccgcagctacggtggcggcatggctgatctcaaggcgggtacctta
agattaatcggcgatcctgaaacacgttatcgtgaagatcccgttcgtatgctaagggcc
gtacgttttgcgactaagctcagtatgaatattgaggacgtgaccgcaaaacccattaaa
caattggcgccactgctcacagatattcctgcggcacgcatgtatgaagaagtgcttaaa
cttttctttgctggcaaagccttagctaacttcgaaatgatgcaagaatacaagttattc
gcccccttatttcctcaggtcgatgccctattaaaagaagatccaaagggtcctgcaatg
aaaatggtgcaggccattatgaaaagcactgacttacgggtaaatgaggataaacctgtt
actccctcattcttttatgcggccatgctttggtatccactgcgtcaacgtgctgaggat
attgccgttgaaagtggcttaactttatatgatgcctttttcgcagcaatgggcgatgtg
atggagcagcaatgccaaaccattagcattccacgtcgctttagcacaccctcaaaagat
atttggcaattacaactacgctttgaccgcagccaaggcactcgtgcttttaaactgatg
gagcaccctaagtttagagccgcctacgatttactcttgctcagaggtgaagtcgagggg
gggaatgttgccaaaagtgctgcttggtggcagcagttcgttgaagccgatgaaaccgag
cgcttgactatcgcccgtagtggtaataagtcatcggggaatcgcaatgctcctcagcgt
cgccgccgtaggccaagtacgactaaagccaaagcagccgaataa
DBGET
integrated database retrieval system
