Shewanella sp. JNE2: MZ182_17335
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Entry
MZ182_17335 CDS
T08546
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shej01011
]
MZ182_17335
Enzymes [BR:
shej01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
MZ182_17335
Peptidoglycan biosynthesis and degradation proteins [BR:
shej01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
MZ182_17335
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_OapA
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
UPO30723
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Position
3887601..3888995
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AA seq
464 aa
AA seq
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MRKNFRQMHAFAVLMLAMLTAHLSGCVATSADNAPTEFTATTPEEIGKSDHSAQETSDTP
EPVEEQYSDVWEKIQHARTIDVHDEAEVRKQRKFFADKQRFMNQVGDRAEPFLYYIVSQL
EARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGRNFGLTINSAYDGRKDALAST
DAVLDYLQHLYDTLGNDWINAVAGYNSGELVIKSAIERNKAKGKPTDFWSLNIPARQVQT
VPKWLAFIQIIREPSHYNLKVSPIANRPFLERLPAPNGVEIGHIANAAGLTKAEFKTYNP
GYRQNMIPSKGKYQIALPIENIGAYQENQDKLYAQKRYDSQSYIVKSGDSLGAIAAKFDI
SVNELKQANNLTSDRIKVGQELTLLTPLAANDKETKVVPATPKTSSKSSAKVTETKAATY
KVKSGDSLDKIARKHKVKLADLMKWNQLNAKSIIKPGQELKLSE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaaaattttcgccaaatgcacgcttttgcagtgcttatgctagccatgctaacg
gcccatctcagtggctgcgtagccacctcggcggataatgcgccaacagaattcactgcc
actacgcctgaagaaataggtaaaagtgaccattcagcacaagagaccagcgatacacct
gaacccgttgaagaacaatacagcgacgtatgggaaaaaattcaacatgcgcgcactatt
gacgtacacgatgaagcagaagtacgtaaacaacgtaaattttttgctgataaacaaagg
tttatgaatcaagttggtgaccgtgcagagccttttttgtattacatcgtcagtcaacta
gaagcccgtaatatgccgcttgaattagccttattacctattgttgaaagcggttataac
ccactagcgcaagccaatggtccggcgggtttatggcagatgattcctgcaactggtcgc
aattttggcctgaccattaattccgcttatgatggtcgtaaagatgcgctggcctcaact
gatgccgttctcgactacttacagcacttatacgataccctaggcaatgactggatcaac
gctgtagcgggctataacagtggtgaattggttataaaatccgcaatagaaagaaacaaa
gcaaagggaaagccaaccgatttttggtcacttaatatccctgcaagacaagtacaaaca
gtccctaagtggctcgcttttattcaaattattcgcgagcctagccattacaacttaaaa
gtgtctcccattgccaatcgccctttccttgagcgactccccgcacctaatggcgttgaa
attggccacattgccaatgcggcgggactcactaaagcagagtttaaaacctataaccct
ggttaccgtcaaaatatgatccccagtaaaggcaaatatcaaatagcccttcccattgaa
aacatcggcgcctatcaggaaaatcaagataaactctatgcccaaaaaagatatgacagc
caaagttacatcgtcaaatcgggtgatagtctaggtgctatagcggctaagtttgatatc
tcagtgaatgagttaaaacaggcgaataacctcacatcagataggatcaaagtaggccaa
gaactcacgctattaacccctttggcggctaatgataaagagactaaagttgtcccagca
acgcctaaaacaagcagtaaatctagcgccaaggtcacggaaacaaaagcggctacttat
aaggtaaaatccggtgattcactggataaaatagcccgtaaacataaagtaaaactggct
gatttaatgaagtggaaccagctaaatgctaagagcattattaaacccggccaagagcta
aagctatccgagtaa
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