KEGG   Shewanella sp. JNE2: MZ182_18265
Entry
MZ182_18265       CDS       T08546                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
shej  Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:shej00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:shej02048]
    MZ182_18265 (hsdR)
Enzymes [BR:shej01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     MZ182_18265 (hsdR)
Prokaryotic defense system [BR:shej02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   MZ182_18265 (hsdR)
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 Helicase_C DEAD DUF4145 HSDR_N AAA_19 RPW8 UvrD-helicase
Other DBs
NCBI-ProteinID: UPO33318
LinkDB
Position
4105431..4109003
AA seq 1190 aa
MGLDTQGQSTEKDSANFSFLKPYDPIFIDLASSAERAFISDPNTTLIKLRQLGEAMAQDI
AARCGIEFDDKTTQADLLFKINRELTLEPVVRQLFHALRIEGNKATHQFRTQHKEALEGL
KLARSLAIWFHHTFGDQKTAFKAGPFVPPEDPSQQLQELQTQIELLRSELNDNHQQLVDN
QQLTTLLAREKEEYAVLAEQMDAEARALSKLAAQHEQALVEQKHQFELRIKALQAELVQL
AQVDNQAATKNKKQLSQQASKAGNHIELSEELTRVLIDQQLNEAKWIADTQRLDYRKGAR
PEKGKNLAITEWPTWYKGKQGRADYVLFCGLVPVAVVEAKKENTNVAGKISQAERYSKGY
KLIAPQQGAWEIEGRTVAWADDADGHYHIPFVYSCNGREFSKQLAELSGTWFRDTRKPSN
TKRALQQFHSPDGLLDKLKRSREAAEQKLQQEGFDYLGLRDYQQKAIAAVESALAQDNTQ
CLLAMATGTGKTRTIIGLMYRFLKAERFRRILFLVDRTALGEQACDSFDEAKLEQNKVLS
SIYNIAELGDMKSAAETRIQVATVQAMVKRIFMSDNPPPLDEFDCIIVDEAHRGYALDQQ
MTEGELATRDASQYLSSYRRVLDYFDAVRIGLTATPAKHTSEIFGKPVYTYSYREAVADD
WLIDHEPPIRYETLLNKHGIKFEKGETVTSINTQTGEIETADLEDELKFDVESFNKRVIT
ESFNEVICQELIKELDPFGDEKTMIFCATDVHADMVKRLLDKAFLEMYGDDYNQAAVAKI
TGQSDKVSQLIRQYKNERYPNIAITVDLLSTGIDVPKICHLVFLRRVKSRILYEQMMGRA
TRRCDDIGKTAFKIYDPVDIYSALEAVNTMKPIVKDPNITLEQLVDELTDDTFLERALNT
PGEQVGSGSGTDSHTNSHAHDVLNQLGQKVMRVMRKATKKAENKPELKAKLEQLEELWGV
APAKLHQHLHQIGPREAAQFFKQHQSLINQLAEVRYLVGSDNMPIIYEGRDEFIERQQNY
GIHEKPADYLESFSHFIKQNINQSAALSVVVNRPKDLTRAQLKEVKLLLDEAGYSEAHLQ
SAWRKNTNQDIAASIIGYIRQAALDEALVPFAQRVNNAMQRIYSEHDWNPNQRKWLDRLA
KQLVHEAVIDKAFVNNRFASDGGAKRFNSVLNDQLDTILDELNAYLWQVG
NT seq 3573 nt   +upstreamnt  +downstreamnt
atgggattagacacacaaggccagagtactgaaaaggactctgctaactttagttttctc
aaaccatacgaccctatttttatcgatttggccagcagtgctgaacgtgcgtttatcagc
gatcccaacaccaccttaattaagctgcgccagttaggtgaagcgatggcgcaagatatt
gcggctcgatgcggcatagagtttgatgacaaaacgactcaggcagatttactcttcaaa
attaatcgtgagttaaccttagagcctgtggtccgccagttatttcatgccttaaggatt
gaaggcaataaagcaactcaccaatttcgaacccaacataaagaagcattagaaggctta
aagcttgctcgtagcctagcgatttggttccatcatacatttggcgatcaaaagaccgca
tttaaagctggcccgtttgtcccacctgaagatcccagtcagcaactgcaagagttacaa
actcaaattgaattattgcgtagcgaacttaacgataaccaccagcaattagtcgataat
cagcaattaacaacattactggcccgtgagaaagaagagtacgcggtattagctgagcaa
atggatgcagaggcgcgagcgttgtcaaagttggccgcgcagcatgagcaagctctcgta
gagcaaaagcatcaattcgaattacgcattaaagcgctacaagctgaattagtacagctt
gctcaagtcgataaccaagcggcgacaaaaaacaagaaacaacttagtcagcaagcgagc
aaagcgggtaatcacattgagttaagcgaagagttaactcgggtactgattgatcagcaa
ttaaatgaggccaagtggatagctgatacccaaaggctagattaccgcaaaggtgctcga
cctgaaaaaggtaaaaacctcgcgattacagaatggcccacatggtataaaggtaagcaa
ggccgcgctgattatgtcctattttgcggcttagtccccgttgcagtggtggaagcaaaa
aaagaaaacaccaacgttgctggtaaaatttcccaagccgagcgttactccaaaggctat
aaactgatagcgcctcaacaaggtgcatgggaaattgaagggcgcaccgttgcatgggcc
gatgacgcagacggccattaccatataccctttgtctactcctgtaatggccgcgagttt
agtaagcaactggcggagttatcaggcacttggtttcgcgatacccgtaaacccagtaac
accaagcgggcgctgcaacagtttcactcgcctgatggcctgcttgataagctaaagcgc
agccgcgaagcagccgagcaaaaacttcaacaggaaggctttgattacctcggtctgcgc
gattatcagcaaaaagctatcgcagctgttgagtcggctttagcgcaagataacactcag
tgtctgctggcaatggccacaggtacaggcaaaacccgcactattattggtttgatgtat
cgatttttaaaggctgagcgttttaggcgtatcttgttccttgttgatagaaccgccttg
ggtgagcaagcgtgcgactcctttgatgaagccaagcttgaacaaaacaaagtgctgtcg
tctatctacaatattgccgagcttggcgacatgaaaagtgcagccgaaactcgcattcaa
gtcgcgacagtacaggccatggttaaacggatttttatgtcggataacccgcccccgctg
gacgagtttgactgcattattgtcgatgaagcgcacagaggttatgccttagatcagcaa
atgaccgaaggtgaacttgccactcgcgatgccagccaatatctgtccagttaccgtcgg
gtgctcgattactttgatgcggtgcgtattggcttaaccgcaacgcctgccaagcataca
agtgagatttttggtaaacccgtttacacctacagttaccgtgaggccgttgccgatgac
tggcttatcgaccatgagccaccgatccgctatgaaacgctgttaaacaaacacggcatt
aagtttgaaaaaggcgaaaccgtcacctccatcaacacccaaaccggtgaaattgaaacg
gccgatttagaagacgaattaaagttcgatgttgaatcctttaataaaagagtgattact
gagtcgtttaatgaagtcatctgccaagaattaatcaaagagttagacccttttggcgat
gagaaaaccatgattttttgtgcaaccgatgtgcatgcagacatggtaaaacgcttatta
gataaagcctttcttgagatgtatggcgatgactacaatcaagcggctgtggctaaaatc
accggtcaaagtgataaagtcagccagttgatacgccaatataaaaacgagcgttaccct
aatatcgccattactgttgacctattatcaaccggtatcgatgtgcctaagatttgtcat
ttagtgtttttacgtcgggtcaaatcacgcattctgtacgaacaaatgatgggccgtgcc
actcgccgctgtgacgacataggtaaaacggcttttaagatttatgatccggttgatatt
tacagcgcgcttgaagccgttaacactatgaagccgatagtgaaagatcccaacattacc
cttgagcagctggtagacgagttaactgacgatacctttttagagcgcgcccttaatacc
cctggtgaacaagtcggttcaggttcagggacagatagtcacaccaatagccatgcccac
gacgtgcttaatcaacttgggcagaaagtgatgcgggtgatgcgaaaagcgactaaaaaa
gccgaaaataagccagagcttaaagccaagcttgagcaacttgaagagttatggggcgta
gcaccagcgaaactccaccagcatctacatcaaattggccccagagaggcggcacaattt
tttaagcagcaccaaagtttgattaatcagttagccgaagtccgttatctggtgggtagc
gacaatatgccgatcatctatgaagggcgtgatgagttcatagagcgtcagcaaaattat
ggtatacacgaaaaacccgctgattatcttgaaagcttcagtcacttcattaagcaaaac
attaaccaatcagcagccttgtccgttgtggtaaatcgacctaaagatctcacccgagct
cagctaaaagaggtcaaattactgcttgatgaggcaggctatagcgaagcccacttgcaa
agtgcgtggcgtaaaaacaccaaccaagatatcgccgccagtattatcggctatattcgc
caagccgcattggatgaggccttagtcccctttgcccagcgggtgaacaacgccatgcaa
cgcatttacagcgaacatgattggaacccaaaccaacgtaagtggctagaccgtctagca
aaacaattggtgcatgaggctgtgattgataaagcctttgtgaataatcgttttgccagt
gacggtggtgccaaacgctttaacagtgtactcaatgaccaactcgataccattttagac
gagctcaatgcctacctgtggcaagtaggttag

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