Shewanella sp. JNE2: MZ182_18510
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Entry
MZ182_18510 CDS
T08546
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
shej
Shewanella sp. JNE2
Pathway
shej02020
Two-component system
shej02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MZ182_18510
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MZ182_18510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shej02022
]
MZ182_18510
02035 Bacterial motility proteins [BR:
shej02035
]
MZ182_18510
Two-component system [BR:
shej02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
MZ182_18510
Bacterial motility proteins [BR:
shej02035
]
Flagellar system
Flagellar assembly proteins
Others
MZ182_18510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA_16
AAA_2
AAA
MCM
AAA_3
AAA_19
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UPO30944
LinkDB
All DBs
Position
complement(4156218..4157528)
Genome browser
AA seq
436 aa
AA seq
DB search
MRSLSIRIEGLNLSADLICKIMHENFCLWNDKMDLPWLTIVNLSDCSPSDVKDYLARFPS
RNQLALLAPEQGELAAAAMRAGVQDYLLIPVESEQLLASIHRLRRLELPDSSLVVSASVS
RQLLMLAHRAATTEASVLLLGESGTGKEPLARYIHRHSSRSHKPFIAINCAAIPESILES
VLFGHVKGAFTGAICDKAGKFEQANGGTLLLDEIGEMPLTLQAKLLRVLQEREVERLGGQ
HAIALDIRIIASTNRDLRQAVELGHFREDLFYRLDVLPLKISPLRERKADILPLAEHFLD
LYHQPDTTSTCYFSEHARQALVSYDWPGNVRELENCIQRALVMRRGLAIQAADLGLNIQL
EVQAVEHPEVTDGLRASKQQAEFQYIIDVLKRFNGQRTLSAQALGMTTRALRYRLVQMRE
AGIDIEMLLEQAGRAA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgagaagcctaagtatacggattgaagggctaaatctatcggcggatcttatatgcaaa
ataatgcatgaaaatttttgcctttggaatgataaaatggacttgccttggctcacaatc
gtcaatctttctgattgtagtcctagtgacgtaaaggattatctcgctcgtttccctagt
cgtaaccagcttgctttgttggcgccagaacaaggtgagttagccgccgcagcgatgcgt
gctggcgttcaagactatttattaattcccgtagaaagtgagcaattgctcgcgtctatt
catcgattacgacggttagagttacctgactctagtttggtggtatcggcatctgtcagt
cggcagttgttgatgctcgcccatcgcgcagcaaccactgaagccagtgttctattactg
ggcgaaagtggtacaggcaaagaacctctcgctcgttatattcaccgtcattcttcgcgt
tcacataaaccttttattgcgattaattgtgctgcaattccagaaagtatccttgagtcc
gtattgtttgggcacgtaaaaggcgcctttacaggtgcgatttgtgataaggccgggaaa
tttgagcaagccaatggcggtacgttattgctcgatgaaattggtgaaatgcctttgacg
ttgcaggcgaaattactgcgagttttgcaggaaagagaagtcgaaaggctgggtgggcag
cacgcaatagcgttagatatcaggataattgcgtctactaatcgtgacttaaggcaggcc
gtagagctcggccatttcagagaagacttattttatcgtttagatgttttaccgttgaaa
atttctcctttaagagagcgaaaggcagatattttgcctcttgctgagcacttcttggac
ttatatcaccagccagataccaccagtacttgttattttagtgagcacgcaaggcaagcc
cttgtgtcctatgattggcccggaaacgtaagggaattagaaaattgtatccagcgggca
ttggtgatgcgtcgtgggcttgcaatacaagcagccgatcttggcttaaacattcagcta
gaagtgcaggcggttgagcatccagaagtgactgatggacttagggcttcaaagcagcag
gcagagttccaatatattatcgacgtacttaagcgtttcaatgggcaacgtaccttaagt
gcacaggcgttagggatgacgacgagagcgttaagatatcgactcgtacaaatgcgggaa
gcagggattgatattgaaatgttattagaacaagcgggccgcgctgcttag
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