KEGG   Shewanella sp. JNE2: MZ182_18710
Entry
MZ182_18710       CDS       T08546                                 
Symbol
rep
Name
(GenBank) DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
shej  Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:shej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shej03400]
    MZ182_18710 (rep)
Enzymes [BR:shej01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MZ182_18710 (rep)
DNA repair and recombination proteins [BR:shej03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MZ182_18710 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_12 PhoH Endotoxin_C2 AAA_11 ResIII
Other DBs
NCBI-ProteinID: UPO30979
LinkDB
Position
complement(4213147..4215159)
AA seq 670 aa
MKLNPAQNDAVHYVSGPCLVLAGAGSGKTRVIINKIAYLVEKCGYKARNIAAVTFTNKAA
REMKERIAQSMGRKEARGLWISTFHTLGLEIIKREHKVLGLKPGFSLFDDQDTLALLKEL
TQDELDEDKDLLKSLASTISNWKGGLIIPEQARKIAQDEQQHLFAMLYQRYAQHMKAYNA
LDFDDLILLPTLLLRHNEEVRTRWQTKIQYLLVDEYQDTNTSQYEMVKLLVGERARFTVV
GDDDQSIYSWRGAKPQNLVLLGTDFPKLKLIKLEQNYRSSQRILRAANILIANNPHVYDK
ALFSELAYGEPLRVLFAANEEQEAERVVAEIVRHKFVGRTQFGDYAILYRGNHQSRLLER
ALMTNRIPYKLSGGTSFFARAEIKDIMGYLKLVVNPDDDNAFLRIVNLPKRGIGPSTLER
LGHFANEKHISMFAAIFEPELNHHLPPAAMSSLYQFGRFIVETGDQAQRGEPVEAVKQLI
RKINYEDYLYETSTSAKAAEMRMKNISELYRWVTEMLAGDELDEPMTLPDVVNRLTLRDM
MERNSEDEGGDQVQLMTLHASKGLEFPYVFMVGVEERILPHQTSIDEDNIDEERRLAYVG
ITRAQRELWFTLCRERRQFGETMRCEPSRFLLELPQDDLVWENRKPQQTEQERIQTGRSH
IANLRDMFKK
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgaaactcaatcctgcccaaaatgatgctgttcattatgtttctggcccgtgccttgtg
ttggcgggtgcgggcagtggtaaaacacgcgtaattatcaataaaatcgcttatttggtc
gaaaagtgtggttataaggcgcgcaatattgcggctgtgaccttcaccaataaagccgca
cgcgagatgaaagagcgaattgctcagtcgatggggcgtaaggaagcgagaggattatgg
atttcgacgtttcatacccttggacttgagatcattaagcgtgagcataaggtattgggt
ttaaagcccggattttctttgtttgatgatcaagataccttggccttactcaaagagtta
acccaagacgagttagatgaagataaagatttacttaagtcgcttgcgagtaccatttca
aactggaagggcggcttaattatcccggagcaggcgcgcaaaatcgctcaagatgagcag
cagcatttatttgccatgctttaccagcgctatgctcaacatatgaaagcttataatgct
ttggatttcgatgatttaattctattgcctaccctgttattgaggcacaacgaagaggtt
cggactcgttggcaaactaagatccaatacttgctggtggatgaataccaagataccaac
actagccaatatgagatggtgaaactacttgtcggcgagcgtgctcgttttactgtagtg
ggggatgatgatcaatctatctactcatggcgtggcgctaaaccacaaaaccttgtattg
ttaggtactgattttcctaaacttaagttaattaagttagagcaaaattaccgttctagt
cagcggattttacgggctgccaacattctgattgcgaataatccccacgtttatgataaa
gcgctatttagcgaacttgcctatggcgagccgctacgagtgttatttgctgctaatgaa
gagcaggaggctgaacgtgtcgttgcagaaatagtgcgacataagtttgttggccgtact
cagtttggcgattatgcgattttgtatcgaggcaatcatcagtcacgcttgcttgagcga
gcactgatgacgaaccgtattccttataaattgagtggtggtacttcatttttcgctcgc
gctgaaattaaggacatcatgggctatctaaagctagtggtgaatcctgacgacgataat
gctttcctgcgtattgttaacttacccaaacgtggcataggtccgtcgacattagagcgt
ctaggtcattttgcgaatgaaaagcatatatctatgtttgcggcgatttttgagcctgaa
ctcaatcaccatcttccgccagcggctatgtcatctttgtatcagtttgggcgttttatc
gtggaaacaggcgatcaagcacagcgcggtgagcctgtagaagctgtgaagcaattaatt
cgtaaaatcaattacgaagattatctatacgaaactagcaccagtgctaaggccgctgaa
atgcggatgaaaaatatctcagagttgtatcgttgggtcacagagatgcttgctggcgat
gagcttgatgaacctatgaccttacccgatgtggttaatcgactaacgcttagggatatg
atggagcgtaatagtgaggatgaggggggggatcaggttcagttgatgactttgcatgct
tcaaagggcttagagtttccctatgtatttatggttggcgtagaggagcggatcttgccc
catcaaaccagcatagatgaagacaatatcgatgaggagcgtcgtttggcgtatgtgggt
atcacccgcgctcaacgtgagctttggtttacgctttgccgtgaaaggcgccagtttggt
gaaactatgcgttgcgaaccgagtcgcttcttgttggaattaccacaagatgaccttgtg
tgggaaaatcgtaaaccacagcaaacagagcaagagcgcatacaaacggggcgaagccac
attgctaatctaagggatatgtttaaaaagtga

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