Shewanella sp. JNE2: MZ182_19990
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Entry
MZ182_19990 CDS
T08546
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shej
Shewanella sp. JNE2
Pathway
shej00061
Fatty acid biosynthesis
shej00071
Fatty acid degradation
shej01100
Metabolic pathways
shej01212
Fatty acid metabolism
shej02024
Quorum sensing
shej04146
Peroxisome
Module
shej_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MZ182_19990
00071 Fatty acid degradation
MZ182_19990
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MZ182_19990
09145 Cellular community - prokaryotes
02024 Quorum sensing
MZ182_19990
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shej01004
]
MZ182_19990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shej04147
]
MZ182_19990
Enzymes [BR:
shej01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MZ182_19990
Lipid biosynthesis proteins [BR:
shej01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MZ182_19990
Exosome [BR:
shej04147
]
Exosomal proteins
Exosomal proteins of breast milk
MZ182_19990
Exosomal proteins of breast cancer cells
MZ182_19990
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Cas9_C
Motif
Other DBs
NCBI-ProteinID:
UPO31217
LinkDB
All DBs
Position
complement(4507406..4509202)
Genome browser
AA seq
598 aa
AA seq
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MSLEQYHVIQLLRQQSASLKDAIALEGFEMAAPWHQVSWQAFDYISSKIAQVLIELGVQV
QDRCVILSQNCPQWTCADIGTLKSRAIVVPIYPTSTIEQASFIVNDAAAKVIFVDDAKQY
AMACELQTICPSLEHVIVFDSSVTLAADKGNQHWHLDTLLAGCYTQEAELNQRLEAANLD
DLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAFSSGDVSLAFLPLSHVFERSWSF
YVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSPESRKKMFA
WAMRVGERQFEAGQRRAKGSLWLSLQWQLANKLVYSKLQAVLGGRLKFMPCGGAALDLNV
GSFFHAIGIPVLCGYGMTETNATVTCNTLDNRVPGSNGQPLLETEIKLGKDDEILVRGAT
VMRGYYNRPEDTAAAFEDGWLKTGDAGRFDANGNLFITDRIKELMKTSNGKYIAPQRVEG
TVGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYESSLELLRHSHVVEHFE
QRLKQLQHELAGFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHKYAHEINAMYSN
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgaacaatatcatgtaattcaacttttacggcagcaaagcgcgtccttaaag
gatgccatcgcgctggaaggttttgaaatggctgctccttggcatcaggtgagctggcaa
gcatttgattatattagtagcaaaattgcacaggtgttgatcgagcttggcgtacaagtg
caagaccgttgtgtcatcctatcgcaaaactgcccgcagtggacttgtgccgatataggt
acacttaagagtcgcgccattgtggtgcctatttatcctaccagtactatagagcaagcg
agttttatcgttaacgatgccgctgccaaagtaatttttgtcgacgacgctaagcaatac
gccatggcgtgtgagttgcagacaatttgcccaagccttgagcatgtgattgttttcgat
tcgagcgtgacactcgctgccgataaaggcaatcaacactggcatttagataccttactc
gctggctgctatacgcaagaagcagagctaaaccagcgtttagaggctgcaaatctcgat
gatttactgacgttaatttatacctctggcaccacgggcgatcctaaaggcgtaatgctg
gattaccgtaatatggcgtcgaccatacgccagcatgatcaaaaactggcatttagctct
ggggatgtgtctttggcctttttgccattgagccatgtatttgagcgcagttggagcttc
tacgtgttgtgtcgtggtggccataacgtctatctgcaaaacacgcaaagagtaaaagag
gcaatcagcgccgtgcgcccacataccttatgtgtcgtgccgcgttttctcgaaaaagtg
tacagtgcagtgcaagacaaagtggctaaatcccccgaaagccgtaaaaaaatgtttgct
tgggcgatgcgtgtgggtgagcgtcagttcgaagccggacagcgccgtgcgaagggaagc
ttatggttatctctgcaatggcaactggcaaataagctggtttacagcaagctacaggct
gtactgggtggacgtttgaaatttatgccctgtggtggtgccgcattagatctcaatgtc
ggctctttcttccatgctattggtattcctgtactttgtggttacggcatgacagaaacc
aacgcgactgtgacctgtaataccttagataatcgtgtgccaggttctaatggtcaacca
ctgcttgaaaccgaaatcaagctaggtaaggatgatgagattttagttcgcggtgccact
gtgatgcgtggttattacaatcgccccgaagacactgccgctgcatttgaagatggttgg
ttaaaaaccggtgatgcagggcgttttgatgcgaacggtaatttatttattaccgatcgt
attaaagaattgatgaaaacctctaacggcaaatatattgcgccacaaagagtggaaggt
accgttggacgttgtccatttatcgaacaagtggcgattattgccgatgctcgcaactat
gtgacggctttgattgtacctgcgtttgagtctttggaagcttgggcgaaagaaaaggga
ctgaagtacgaatcatccctagaattgctacgccatagccatgtggttgagcattttgag
cagcgtcttaagcaattgcagcatgaattggcggggtttgagcagattaaaaagttcact
ctgttgcctgaagcattttcaatggaagcaggtttaatcaccccaacgctcaagctgcgg
cgcaagatgatttaccataaatacgcccatgaaattaatgctatgtatagtaattga
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