Shewanella sp. LZH-2: JM642_00010
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Entry
JM642_00010 CDS
T10525
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel03030
DNA replication
shel03430
Mismatch repair
shel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JM642_00010 (dnaN)
03430 Mismatch repair
JM642_00010 (dnaN)
03440 Homologous recombination
JM642_00010 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shel03032
]
JM642_00010 (dnaN)
03400 DNA repair and recombination proteins [BR:
shel03400
]
JM642_00010 (dnaN)
Enzymes [BR:
shel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JM642_00010 (dnaN)
DNA replication proteins [BR:
shel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JM642_00010 (dnaN)
DNA repair and recombination proteins [BR:
shel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JM642_00010 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
PglD_N
DUF2807
Motif
Other DBs
NCBI-ProteinID:
QRK79572
LinkDB
All DBs
Position
1404..2504
Genome browser
AA seq
366 aa
AA seq
DB search
MKFSIDRDALLKPLQLVCGAVERRHNLPILANLLVEVSGHSLKLTGTDLEVELVGQAVIH
GDIEEGRTTVPAKKLLDIVKSLPEQSELKVEQQDNKWLLRSGRSRFSLATLPAEEYPNVE
AFQAEIEFTLKQGVLKSLIDATQFSMANQDVRYYLNGLLLETEGNVLRAIATDGHRLALS
HRTIDAQLPEKQVIVPRKGVMEMARLLEADDLDIAIAIGDNAIRATTSTTVFTSKLVDGR
FPDYRRVLPKGGDKIVIASRNHFKQALTRASILSNEKFRGVRIQLEAGLLKITANNPEQE
EAEEIIDVDYNNQPLEIGFNVSYLLDVLNNLKSDDVRITLIDGNSSALLENHLEEDSMYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcaattgatagggacgccctattaaagccgcttcaattggtttgtggtgcg
gtagaaagacgccataacttgcctattttggcaaatctccttgtagaagttagtggtcac
tcactcaaattaacaggtactgaccttgaagttgagttagtcggtcaggcggttattcat
ggtgatatcgaagaaggtcgaactacagttcctgctaagaagctgttagatatcgttaaa
tctttgcctgagcaaagcgagcttaaggtcgagcagcaagataacaagtggttgttacgc
tctggccgtagtcgtttttcgctggcaaccctgcccgcagaagaataccccaatgtggaa
gcctttcaggcggaaatcgaattcacccttaagcaaggcgtgctgaagtcgttgattgat
gcgacccagttttcgatggcgaaccaagacgttcgttactatctgaatggtttattgctc
gaaaccgaaggtaatgtgctgcgcgccattgctaccgacggtcaccgcttagccttaagt
cacagaaccatagatgcacaattacctgaaaaacaagtcatcgtgccccgtaaaggcgtg
atggaaatggcgcgtttgttggaagccgacgatttagatatcgcaattgccattggtgat
aatgcgattcgtgcgaccaccagcactactgtctttaccagtaaattagtcgatggtcgt
ttccccgattatcgccgcgtgttacctaagggcggtgataaaatcgttatcgccagccgt
aaccacttcaagcaagctttaacgcgcgcttctattttatcgaatgagaagtttcgtggt
gtacgcattcagttagaagcgggattactgaaaatcaccgctaataacccagagcaagaa
gaagcggaagaaatcatcgatgtggattacaacaatcagccactcgaaattggtttcaac
gtcagttacttattggacgtgctcaacaaccttaagtccgatgatgtgcgtattacctta
attgatgggaactcgagtgctttattggaaaaccacttggaagaagattccatgtatgtg
gttatgccaatgcgcttatag
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