KEGG   Shewanella sp. LZH-2: JM642_00125
Entry
JM642_00125       CDS       T10525                                 
Symbol
def
Name
(GenBank) peptide deformylase
  KO
K01462  peptide deformylase [EC:3.5.1.88]
Organism
shel  Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:shel00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    JM642_00125 (def)
Enzymes [BR:shel01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.88  peptide deformylase
     JM642_00125 (def)
SSDB
Motif
Pfam: Pep_deformylase
Other DBs
NCBI-ProteinID: QRK79594
LinkDB
Position
complement(30682..31188)
AA seq 168 aa
MALLKVLRFPDERLRTQAQPITEFTAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIV
MDLQDEVERPKVFINPEIIASSGDFCNEEGCLSVPGIYAKVDRAEFVTVKALDRHGNEFT
VEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAKQDAK
NT seq 507 nt   +upstreamnt  +downstreamnt
atggcactattaaaagttttacgctttcccgatgaaagattgcgaactcaagcacaacct
atcacagagtttactgctgagttgcaaactcaaatcgatgatatgttcgaaaccatgtac
caagaaaaagggattggtttagccgcaacccaggttgattatcataaacaactgatcgtc
atggatttacaagacgaggttgaacgtcctaaagtctttatcaatcccgagattattgcc
agtagcggtgatttctgtaacgaagaaggttgtctgtctgtccctggtatctatgccaaa
gttgaccgcgccgaatttgttaccgttaaagcactggatagacacggtaatgaattcacc
gttgaagccgatgacctatttgcgatttgcattcagcatgaaatggatcacctgaaaggt
aagttatttgtcgactacctgtcgccattgaagcgccaacggatcaaacagaaacttgaa
aaagcggccaaacaagacgccaaataa

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