Shewanella sp. LZH-2: JM642_01995
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Entry
JM642_01995 CDS
T10525
Name
(GenBank) YcaQ family DNA glycosylase
KO
K09927
uncharacterized protein
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
JM642_01995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkZ-like
WHD_3rd_Lhr
Motif
Other DBs
NCBI-ProteinID:
QRK79924
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Position
410690..411856
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AA seq
388 aa
AA seq
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MSSPFSPREWLQLNMQQQGLLQPQTSVCELISRLGYVQIDSINVVERAHHHVLHSRIPQY
QPQMLDTALAQGDIFEYWSHAAAYLPIADYCFSLQRKQQLQNGGKHWFEPDDNAMQEVRA
RIRAEGPLKASDFEHTEGKNGAWWDWKPAKKALEQLFMRGELMVVRRDKFQKCYDLTERV
LPSHIDTQAPSEIEFARYLIKRYLDAHAFGSAAQIAYLRKGIKANVNEQLAAMQSQGELA
SFKAEGQWYFYRPELQLTAAMPNRVWLLNPFDNLLIQRQRLKQWFDFDYQIEVYVPAEKR
QYGYYSLAILWRDCFVGRVDVKAERQSGLLLLQQLTLEEGFSGMDDDFCAAFEAAVTEYA
RFNGCSRWKLVKANHKEFKQLYARQQKI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcctttttcaccccgtgagtggttgcaattgaatatgcaacagcagggctta
ttacaaccgcagacttcggtctgtgagctgattagccgtctcgggtatgtgcaaatcgat
tcgattaatgtggtcgagcgggcgcaccaccatgtgttgcatagccggataccacagtat
caaccgcagatgttagatactgcgctggcacagggcgatatttttgaatattggtcccat
gcggcggcatatttacccattgccgactactgttttagtttgcaacgtaaacaacagctg
caaaatggcggcaaacattggtttgagccagacgataacgcgatgcaggaagtgcgcgcc
cgcattcgcgccgaagggccacttaaagccagtgactttgagcatactgaaggcaaaaac
ggtgcctggtgggactggaaacccgctaaaaaggcgctggaacaactgtttatgcgcggc
gagttaatggtggtgcgcagggataaatttcaaaaatgctatgatttgactgagcgcgtg
ctcccaagtcatatcgatacccaagcgccgagtgagatcgagtttgctcggtacttaatt
aagcgttatctcgatgcccatgcctttggctcggcagcgcaaatcgcttatctgcgcaaa
ggcataaaagctaatgtgaatgagcaattagccgctatgcagtctcaaggtgagttggca
agctttaaggctgaagggcaatggtatttttatcgccccgagttgcagttaaccgctgca
atgcccaaccgagtctggttactcaatcccttcgataatctattaattcagcggcagcga
ttaaagcaatggtttgattttgattatcaaattgaagtctatgtgcccgccgaaaaacgc
caatatggctattactccctcgcgattttgtggcgtgactgctttgttggtcgagtggat
gtgaaagccgagcggcaaagcggtttactgttattacaacagctgaccttagaagaggga
tttagcggcatggatgatgacttctgtgcggcatttgaggcggcagttactgagtatgcg
cgttttaatggttgcagccgctggaaactggtgaaggctaaccataaggaatttaaacaa
ctatacgcacggcagcagaagatctaa
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