Shewanella sp. LZH-2: JM642_02025
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Entry
JM642_02025 CDS
T10525
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K18136
TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
Organism
shel Shewanella sp. LZH-2
Pathway
shel01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JM642_02025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shel03000
]
JM642_02025
Transcription factors [BR:
shel03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JM642_02025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_HI_0893_C
TetR_N
TetR_C_10
McsB_C
HTH_Tnp_1_2
TetR_C_24
HTH_3
HTH_Tnp_4
Imm63
Cmr2_hel_dom2
Motif
Other DBs
NCBI-ProteinID:
QRK79930
LinkDB
All DBs
Position
complement(417317..417889)
Genome browser
AA seq
190 aa
AA seq
DB search
MDNKRDLILRSAEKIIATEGLHNLSMQKLAVDAGVAAGTIYRYFKDKEDLIIELRKDVLQ
QIASKLLENINEGSFDEKFRRLWFKIVELGREQSHANLSFAQYSHLPGVDAPEHQAFERE
IFQPLHQLFEQAKNQGMIQKLDNTLLFSIAFEPAIAIGKRLRRGHLECTENEIRRACELC
LKAISINLQF
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggataataaacgcgacttaatactccgctccgccgaaaaaattattgcgacagaggga
ttacataatctttcaatgcaaaaactagcagtagatgcaggcgttgccgcaggtacgatc
taccgctacttcaaagataaagaagatttgatcattgaactgcgtaaagacgtattacaa
caaattgccagcaagttgcttgaaaacattaatgaaggcagctttgacgaaaaatttcgc
cgcctatggttcaagattgttgaactgggtcgtgaacaatcccatgcaaatttgagtttt
gctcagtattcccacctcccaggggtagatgcacctgagcaccaagcatttgaaagagaa
atatttcaaccgctacaccaattatttgagcaggcaaaaaaccaaggaatgattcaaaag
cttgataataccttgttgttttctatcgcctttgagccggctatcgctataggcaaacgc
ctacggcgaggccatttggaatgtacagaaaatgaaatccggcgggcatgtgaattatgc
ctaaaggccatttcaatcaatcttcaattttaa
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