Shewanella sp. LZH-2: JM642_03470
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Entry
JM642_03470 CDS
T10525
Name
(GenBank) tape measure protein
Organism
shel Shewanella sp. LZH-2
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Gene cluster
GFIT
Motif
Pfam:
TMP_3
ATG17_like
GvpG
Rota_NSP4
SHOCT
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
QRK80185
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Position
752184..756110
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AA seq
1308 aa
AA seq
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MADKTLELALRIVAEATGKQHIAALVDELKRIGAESDAANPKTQALADEIDSVSDASQAG
ANQVDELKNSLDPLSNQLDQVAQSGRNTRTQTEQLTNELKPLATGLDDVGDSSQSTSQKA
NALANKLDELANQQDLINTFKRSRNELEQQELAVTAAALALQDLKQRASQTDAPFVQLAR
SIDVAEKELEQMRTELAQQSASHTKLQNALSKSGIDYNNLTTAQRKLSSEFDGTGRNVDK
FANQLDKGNASARDHAASLRGVIGQVTALAGAYVGFDRVAQAVKDIFATGDQFERLGVQM
NAVMGSFESGRQATAWVKQFAIDVPLQLNEVNQAFVKAKAFGLDPMNGTMKAIVDQAFKL
GGGFQEVEGITLALGQAWAKQKLQGEEILQLIERGVPVWDMLAKVTGKNSLELEKLSSQG
KLGRDVIQALIDEMGRASNGSAAAQMALLSGQVSNLKDNLTNFYDLVAQSGALDWLKGQI
SQLNQEFAAMASDGRLQQWAQQISDTIVSIGSAVQDGAAMLYHYRDEIGFVAKAFLALKV
GSYFSDVITGANAAIGAMRLYTGAIAGTTVASETATLAAGKLKAALAAAAKAGLYLALIN
ELVELARVYQELLIAEEALAKSKRTAAASAKQLAFSLKDLSEQTGVAFTTMAEFNKAVDD
GKLIYDDASGKWKNAAKAMEEVKQTAVEVVEPIKLTVDEALRLTLTLSDQVKTLDDVKGG
MGGFIRQIDAALEPLKAAGSEYAGHVKLLTELRAKFEEQQSYLDATAKGTAALEQAYKDL
GITSSQALIEATNKAEAAFNLIRNNREPLEQQKDAFLAWAKAALTAAEATGAVVPESLKA
QAATLGLSKELSDLTAKQYGYSDSIKELSPEQAKLSRAVAETEARLKQCRDVMNSSTVSS
KEKSKAQQELINLQGKLSVQTQQLSEVQALEAANYEQIKSKYAAVSDEMLRLEKAYKDGG
ITAEEYLQQKERLVQVLNVLQRLMGGLQDGEQETDEQVKETNKTLAEQRQELEQLEETTG
RATEYVNLFAGAYAHLNKQFSFNQDSTEKLNARLDELTKSIMNNMRVNTGFWGVLAQLSN
QAFIREKQIINETLLTRKWAEELESSTITLSRVNQISRESGYLIRELGDEELKPLQSAID
ATRNRILGLRDDINATLGSLKDEMDQLNNNQAAIEKRRYEQQQAELKAQLDAARTAQDNE
SIASAQEALQLSQQIYATKLKQIEAEAAERNARAKDSVSSSASTATNSTRSNASQAPAPS
VNNPNTGGSVQVYRLELVMPSGNVLKADLLDEFKQLFLGELEQIKATS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaaccttagaactcgccctgcggatcgtggccgaagccacgggcaagcag
catattgccgccttggtcgatgagcttaagcgcatcggggccgagtcggatgcggcgaat
cctaagacacaagccttagccgatgaaattgatagcgttagcgacgccagtcaagcgggc
gcgaatcaagttgatgaactcaaaaacagccttgatcccttaagtaatcagctcgaccaa
gttgcccaaagcggccgcaatactcgcacgcaaaccgagcagctcactaatgagcttaag
cccttagccactgggctggatgatgttggcgatagcagccaatcgaccagccaaaaggcc
aatgccttagccaataagctcgatgagctggctaatcagcaagacctaatcaataccttt
aagcgctcccgcaatgagcttgagcagcaagagcttgcagtgacggcggcggccttagca
ctgcaggacttaaagcagcgtgccagccaaacggatgccccctttgtgcagctggcccgc
tccatcgatgtggccgaaaaagagctggagcagatgcgcaccgagttggcgcagcaatcg
gccagccacactaagctgcaaaatgccttatccaaatcgggcattgactataacaacctc
accaccgcacagcgcaagttaagtagcgaatttgacggtactggccgcaatgtcgataag
tttgctaatcagctagataaaggcaatgccagtgcccgcgatcatgctgccagcctgcgt
ggtgtgatcggccaagtgaccgccttggcgggtgcatatgtgggctttgaccgcgtagcc
caagccgttaaagacatctttgccacaggggatcaattcgagcgcctaggcgtgcagatg
aatgccgtgatgggcagctttgaatctggccgccaagcgaccgcttgggtaaagcagttc
gccatcgatgtgccactgcaactcaatgaagttaaccaagcgtttgtaaaagccaaagct
tttggccttgacccgatgaacggcaccatgaaggcgattgtggatcaagcctttaaactc
ggtggagggtttcaagaagtcgaggggatcaccttggctttgggccaagcctgggcaaaa
cagaaattacagggcgaggagatcctgcaactgattgagcgcggcgttcctgtgtgggac
atgctggcgaaagtcacgggcaagaatagcctcgaactagagaagttaagcagccaaggc
aaactggggcgcgatgttatccaagcccttatcgatgagatgggccgcgccagcaacggc
agcgccgccgcgcaaatggctttactcagtggccaagtttctaaccttaaagataatctc
acaaacttttacgacttagtggcgcaatcgggcgcgcttgattggcttaaggggcaaatc
agccagctaaaccaagagtttgctgccatggcaagcgacggccgtttacagcaatgggcg
cagcaaatcagcgataccatcgtgagcattggctctgcggtgcaagatggcgcggccatg
ctgtaccactaccgcgatgaaatcgggtttgtggctaaggcatttttagccttaaaagtt
ggtagctattttagtgatgttatcacgggtgctaatgccgccattggtgcaatgcgcttg
tataccggagccattgcaggcacaacagtcgccagtgaaactgccaccttagcggcaggt
aagttaaaagccgctttagccgccgcagctaaggctggtttgtatctagcattaatcaat
gagttggttgaattggctcgggtgtaccaagagctactgatcgccgaagaagccttggct
aaatccaaacgtacagcagcggctagcgcaaaacagttggcgttttcccttaaggattta
agcgagcaaacgggcgtagcttttaccactatggccgagttcaacaaggcagtggatgac
ggcaagctgatttatgacgatgccagcggtaaatggaagaacgccgccaaagctatggag
gaagtcaagcaaactgcggttgaggtggttgagccgattaagctgaccgtcgatgaagcg
ctgcgcctgactttaaccttaagcgatcaggttaaaacccttgatgatgttaaaggcggt
atgggcggatttattcgccaaattgatgcggccttagaacctttaaaagcagcgggatca
gagtatgcgggccatgtaaaactgctcacagaactgcgggcaaaatttgaggagcagcaa
agctacctcgatgccacggccaaagggactgcagcgttagagcaagcctataaagactta
ggcatcaccagcagccaagccttgattgaggcgaccaataaggctgaggctgcttttaat
cttatccgtaataaccgcgaaccgcttgagcagcaaaaggatgcatttttagcgtgggca
aaagccgcgctcacggctgccgaagccactggtgctgtggttcccgaatccctaaaggcg
caggcggcaacccttggactctctaaagagttaagtgatctgacggctaagcagtacggc
tatagcgatagcattaaagaactctcacctgaacaggcgaagttaagccgtgccgttgcc
gaaaccgaagcgcgcttaaaacaatgccgtgatgtgatgaatagctcgacggtatcgagc
aaagaaaaatccaaagcgcaacaggaactcattaacctgcagggcaagctgagtgtgcaa
actcagcagcttagcgaagtacaagcgcttgaggctgctaactatgagcagatcaaaagt
aagtatgccgcagtgagtgatgagatgctgaggctcgaaaaagcctataaggatggcggc
attactgctgaggagtacctgcagcaaaaagaacgcctagtgcaagtgctcaacgtactg
caacgcctaatgggcggcttgcaagatggtgagcaagagactgacgaacaagtcaaagag
accaacaaaaccttagctgagcagcgccaagagcttgagcaattagaggaaaccactggc
cgcgccactgagtatgtcaacctatttgcgggtgcgtatgctcacctcaataagcaattt
agctttaaccaagacagcaccgaaaagcttaatgctcggctcgatgagctgaccaaaagc
attatgaacaatatgcgggtaaatactggcttttggggcgtgctggcacagctcagtaac
caagcctttatccgcgaaaagcagatcattaatgaaaccttgctgacgcgtaagtgggct
gaggagcttgaaagctcgacgataacccttagtcgggtgaatcaaatcagtcgcgagtcc
ggctatttaatccgtgaattaggtgatgaagaacttaagccgctgcagtccgccattgat
gcaacccgcaatcggattcttggcctgcgtgacgatatcaacgcgaccttgggcagtctc
aaagatgagatggatcagctcaacaataaccaagctgctatcgaaaagcgccgctatgag
cagcaacaggccgagcttaaggcgcagctcgatgctgcccgaaccgcccaggataatgag
tccattgccagtgcccaagaagccctgcaactcagtcagcaaatctacgccaccaaacta
aaacaaatcgaagccgaggctgctgaacgtaacgcacgggctaaagatagcgtatcaagc
agcgccagtaccgcgacgaattccacgcgcagcaatgccagccaagcgccagcgccatcg
gtcaacaatccaaacactggcggcagtgtgcaggtgtatcgactagaactggtgatgccc
tcgggtaatgtgctgaaggctgatttattggatgagtttaagcaactgtttttaggcgaa
cttgaacagattaaggcgacatcatga
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