Shewanella sp. LZH-2: JM642_03855
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Entry
JM642_03855 CDS
T10525
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JM642_03855 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shel03032
]
JM642_03855 (dnaB)
Enzymes [BR:
shel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
JM642_03855 (dnaB)
DNA replication proteins [BR:
shel03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JM642_03855 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
divDNAB
GvpD_P-loop
DUF5410
nSTAND3
DUF1421
PAXNEB
Gal-bind_lectin
Motif
Other DBs
NCBI-ProteinID:
QRK80261
LinkDB
All DBs
Position
836927..838333
Genome browser
AA seq
468 aa
AA seq
DB search
MSQQGAFKPKSKPRDLQVDSLKLPPHSIEAEQSVLGGLMLDADAWDKVAETVVKEDFYSR
SHRMIFAAMHRLVETGQPIDLITVSEQLELENQLEEAGGFAYLGEIAKNTPSAGNIVSYA
EIVRERAVVREMIRVAHEIADAGYNPEGRDSSALLDLAESKVFKIAEQRTNANEGPEGIK
TILEKTVDKIEQLYNNPHNGVTGVSSGFTDLDKMTAGFQSGDLIIVAARPSMGKTTFAMN
LCEQAAMNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDEDWARVSSTMGI
MLEQGKMYIDDGSGLTPTEVRSRARRIAREHGGLSMIMVDYLQLMQVPALSDNRTLEIAE
ISRSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEV
YNNDSPDKGTAEIIIGKQRNGPIGRVRLTFQGQFSRFDNYAGPQFEED
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaaggtgcttttaagcctaagagtaagccaagggatttgcaggtcgatagc
ctcaagctaccgccgcattcaattgaggctgaacaatcggtattaggcggcctcatgtta
gacgccgacgcttgggataaagtggctgaaaccgtagtgaaggaggatttttattctcgc
tcgcaccggatgattttcgccgccatgcaccgtttagtcgaaacaggccaacctatcgac
ttaattacggtttctgaacagcttgagcttgaaaaccaacttgaagaagcgggcggcttt
gcctacttgggcgagattgccaaaaacaccccgagtgcgggcaacattgtttcctatgct
gaaattgtccgtgagcgcgcagtcgtacgcgagatgatccgcgttgcccatgagattgcc
gatgcgggttataaccctgaaggccgcgattccagcgctctactcgatttagctgagagc
aaagtctttaaaattgctgagcagcgcaccaatgctaacgaaggccctgaaggcatcaaa
accattctggaaaaaaccgttgataagattgagcagctctacaacaacccacacaacggt
gtgacaggggtatcgagtggctttactgatctcgataaaatgacagcaggctttcaatcc
ggcgacttgatcatcgtggcggcgcgtccgtcgatggggaaaacgacctttgcgatgaac
ctgtgcgaacaggcggcgatgaatgaagacaagcccgtgcttattttcagcctcgagatg
ccctcagaacagatcatgatgcgtatgttggcctctttagggcgcgttgatcaaaccaaa
atccgtaccggacaactcgatgatgaggattgggcgcgggtatcctcgaccatgggcatt
atgcttgagcaaggtaagatgtatatcgatgatggttcaggcttaacgccgaccgaagtg
cgcagccgtgcccgtcgtattgcccgcgagcatggcggattatcgatgatcatggtcgac
tacttgcagctgatgcaagtgccggcattatcggacaatcgtacccttgaaattgctgaa
atctctcgttctcttaaggcattagctaaagaattagaaatccccgttatcgcactttcc
cagcttaaccgctcgctcgaacaacgtgccgataaacgccctgtgaactcggacttacgt
gaatcaggttctattgagcaggatgcggatctcatcatgtttatttaccgtgatgaggtg
tataacaacgactctcccgataagggcacggcggaaatcattatcggtaaacagcgtaac
ggtcccattggacgtgtgcgcttgaccttccaaggccagttttcccgttttgataactat
gcaggtcctcagtttgaagaagattaa
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