Shewanella sp. LZH-2: JM642_04160
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Entry
JM642_04160 CDS
T10525
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00541
Biosynthesis of various nucleotide sugars
shel01100
Metabolic pathways
shel01250
Biosynthesis of nucleotide sugars
Module
shel_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JM642_04160 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shel01005
]
JM642_04160 (kdsA)
Enzymes [BR:
shel01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
JM642_04160 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
shel01005
]
Lipid A
JM642_04160 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
QRK80320
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All DBs
Position
902414..903262
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AA seq
282 aa
AA seq
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MSNKIIKLGSIEIANDKPFVLFGGMNVLESRDLAMSIAETYAEVTQKLGIPYVFKASFDK
ANRSSVNSYRGPGMEEGLKIFEEIKKTFNLPLITDVHEPYQCAPVAEVVDIIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNDEIILCERGSCFGYNNLVVD
MLGMDEMKQSGYPVIFDATHALQRPGGRADSAGGRRAQATELARSGMALGLAGLFIEAHP
DPDNAKCDGPCALPLHQLENYLKQMKAMDDLVKSFEPIDTSK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaaatcataaagttaggttcaatcgaaattgcaaatgataaaccttttgtg
ctattcggtggcatgaatgtgcttgagtctcgcgatctcgcgatgtcgattgctgaaacc
tatgccgaagtgactcaaaaactagggatcccctatgttttcaaggcatcgttcgataag
gctaatcgctcttctgtcaactcttaccgtggtccaggcatggaagaaggcttaaagatt
tttgaagaaatcaaaaagaccttcaatctgccactcattaccgatgtgcatgagccttac
caatgtgcgcctgtagctgaagtggttgatattattcaattaccagctttcttagcgcgc
caaacagaccttgttgtcgcgatggcgaaaacgggcgctatcatcaacgtgaaaaagccg
cagtttttagccccccacgaaatgcgccatatcatcactaagtttaatgaagcgggtaat
gatgaaattatcctgtgtgaacgtggttcatgcttcggttacaacaacctagtagtagat
atgctgggtatggacgagatgaagcaatcgggttatccggtgattttcgatgccacccac
gcattgcaacgcccaggtggccgtgctgattcagcgggaggccgtcgtgctcaggcgact
gaattagcccgtagtggcatggcattaggcttagcaggtctgtttatcgaagctcaccca
gatccagataacgctaagtgtgatggtccatgtgcgttacctttgcaccagttagaaaat
tatctgaagcagatgaaagcgatggatgatttagtcaaatccttcgagccaattgatacc
agcaagtaa
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