Shewanella sp. LZH-2: JM642_04895
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Entry
JM642_04895 CDS
T10525
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
shel Shewanella sp. LZH-2
Pathway
shel02020
Two-component system
shel02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JM642_04895
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JM642_04895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
shel02035
]
JM642_04895
Bacterial motility proteins [BR:
shel02035
]
Flagellar system
Chemotaxis proteins
MCPs
JM642_04895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
HAMP_2
DUF948
CovS-like_HAMP
PycTM
DUF4229
HEF_HK
Motif
Other DBs
NCBI-ProteinID:
QRK80456
LinkDB
All DBs
Position
complement(1077219..1079240)
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AA seq
673 aa
AA seq
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MKVNVATRVIGGFSIVTLLLVLLGFTSYLTNISLKDSSAMMQELSLPALKSTNHLTESLS
EQQRQVLIAYHAPKSRLIPDIRKVFNDHSAQFKNEISNLNQLVQKQNNLSSLISQLNTSF
STFERDSLAMLTEREAALSKQEQLINLKKKLENAADDASSVLLDIIDLENSQNPDAQSLA
ASASAIDSSMGNIITTIADLVTNEEMSKHELISKELDYILSESKNKLEYVNRHAQGIIEA
DTLESINQDIKKVLALLEGSDSMVQLKASQLNHALAASNQLSIIEKDAKIIDRNMEEVSN
NIEAVAAQMSQETIAQIDAASIRTMIVVLIAIVVAVIISFAVVTPLKRSLNQVNNALNVL
ASGNLTHKLDDSGHDEFAELAKNCNRLVDSLRGLIAGILDRSNQLAAAAEQTSAITAQTT
TGIQEQKNQVDQVATATTELSSSAQQVSMSADDALAQIKQADQEAKHMRAIAEENKHTIL
ALAEEVAKAGQVINKVQSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAV
VADEVRSLASRTQVSTREIQQMIEVLQQGAQQAVAAMDMGRAQANACVAKTEQANLALET
ISQSVHKAYDAGTHIAHAAQEQNLVSQQVSEKLEHIAAISEETAIGADQTAQSSHQVAKL
AEELQASVGEFRV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaatgtagccacccgagtcattggcgggtttagcatagtcacgcttttactt
gtgttgttaggatttacctcttacctgacaaacattagcctcaaagatagttcggcgatg
atgcaagaactcagcctgccagccctaaagtcgaccaatcatttaaccgagtccctgagt
gagcaacagcgtcaagtattaatcgcttaccatgccccaaaatcccggctcattcccgat
atccgtaaagtatttaacgaccatagcgcccagtttaaaaatgagatcagcaatctcaac
cagcttgttcaaaagcaaaacaacttgtcatcattgatttctcaattaaatacaagcttt
tctacctttgagcgggatagtttggccatgcttaccgagcgagaagccgcgttaagcaaa
caagaacagcttatcaatttaaaaaagaaactcgaaaatgccgccgatgatgcctcatcg
gtactgctcgatattatcgatttagaaaatagccaaaaccctgatgcccagagtcttgca
gcttcagccagtgcaattgatagcagcatggggaatatcatcaccaccattgctgatttg
gtgacaaacgaagaaatgagtaaacacgaactcatttccaaggaacttgattacattctt
agcgaaagcaaaaataagctcgaatacgttaaccgccatgcgcagggtattattgaagct
gataccttagaatcgattaaccaagatattaaaaaagtactggcactcctcgaaggctca
gattctatggtgcaactcaaagcgagccagctgaaccacgcactggcggcatcgaatcaa
ctcagcattattgagaaagacgctaaaatcatcgatcgtaacatggaagaagtgagcaat
aatatcgaagcggttgcggcacaaatgagccaagaaaccattgctcaaattgatgcagcc
agtatccgcactatgattgtggtgcttatcgcaattgttgtcgccgttattatcagcttt
gccgtagtcacgcccctaaaacgctcgctgaaccaagtaaacaatgcgctgaatgtgctc
gcttcaggtaatttaacccataaattagatgattcaggtcacgatgagtttgctgaactt
gccaaaaactgtaatcgcttggtcgatagtttacgcggcttaattgcgggtattttagat
cgttcaaaccagcttgccgccgcagctgaacagacctctgcaatcaccgcacaaaccacc
acgggtatccaagaacaaaagaatcaagtcgatcaagtggctactgcaacgacagaatta
agctccagcgcgcaacaagtgtcgatgagtgccgatgatgccctcgcacaaattaaacaa
gctgatcaagaagctaagcatatgcgtgctattgccgaggaaaataaacacaccattctg
gccttagcggaagaagtggctaaagcaggccaagtgattaacaaggtccaatcggatagc
gcctcaattgggtcgattttggatgtgatccgcggtattgccgaacagacgaatctattg
gcattgaacgcggccattgaagccgcgcgggcgggtgaacaaggccgtggctttgcggtc
gtcgccgacgaagtaagaagcctagcatcaaggacccaagtctcgacccgtgaaattcaa
caaatgattgaggtactacagcaaggggcacagcaagcagtggctgcgatggatatgggc
cgtgcccaagccaatgcctgcgtagcaaaaacagaacaagccaaccttgccctagagacc
atcagccagtcggtgcataaagcctatgatgcaggcactcatattgcccacgccgcgcag
gaacaaaatttagtaagccaacaagtgtctgaaaaactagaacatattgcagcaatttcg
gaagagaccgcgattggcgcagatcaaaccgcccaatcaagccatcaggtggctaagctt
gccgaagagctacaagcttctgtcggtgaatttagagtgtaa
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