Shewanella sp. LZH-2: JM642_05265
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Entry
JM642_05265 CDS
T10525
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shel02000
]
JM642_05265
Transporters [BR:
shel02000
]
Other transporters
Pores ion channels [TC:
1
]
JM642_05265
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
OprF
DUF748
Opacity
TSP_3
Phenol_MetA_deg
YqbF
DUF3575
Motif
Other DBs
NCBI-ProteinID:
QRK80519
LinkDB
All DBs
Position
complement(1161604..1162716)
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AA seq
370 aa
AA seq
DB search
MDLEKMMKNTLKVVLLTSMLPLAASASQELTPWYVGAGLGVNNYEHIATDNGDDNPYAWD
IFAGYMFNDYFGAEIGYRDLGSADWTNGGISNDADVKGATLGLVGVWPLGNRWSLSAEAG
AMYYTLENSQHTGTTSSSYSSNDFAPYFGAGVGYNFTDNLKLQAKYRRYENLDDTDFNTI
EADSNYWGLELSYRFGTPAAVAPVAAAVVAAAPVDSDNDGVYDDKDQCPATPATHKVDSV
GCTIYENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYLNKNPEFTVEIAGHASNVGK
PEYNMVLSDKRADAVAKILVEKYGISQSRVTSNGYGITKPLVAGDSKEAHAANRRIEAIV
TTTEKQPVLK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggacttagaaaaaatgatgaagaatacattaaaagtagttttacttacatcaatgctt
ccacttgctgccagtgcatctcaagagttaactccttggtatgttggtgcaggtttaggc
gttaataactatgaacacattgcaactgataacggcgatgataacccatacgcatgggac
atcttcgcaggctatatgtttaatgactactttggtgcagaaatcggctatcgtgatcta
ggtagtgcagattggactaatggtggcattagcaatgatgcagatgttaaaggtgcaact
ctgggcttagtcggtgtatggccactaggtaaccgttggagcctgtctgcagaagcgggt
gcaatgtactacaccttagaaaacagccaacatactggcacaacttcaagctcatacagc
tctaacgattttgcgccttactttggcgcaggtgttggttataacttcaccgataatctg
aagttacaagctaaataccgccgttatgaaaacttagacgacacagacttcaacacaatc
gaagctgacagcaactattggggcttagaattaagctaccgttttggtactccagcagca
gtggctcctgtagctgccgccgttgttgcagcagcaccagttgactcagacaacgatggt
gtatacgacgataaagatcagtgcccagcaacgcctgcaactcacaaagttgactctgtt
ggctgtactatctatgaaaacgttaaaaagcaagaagatgtaggttctatccagtttgct
aacgattctgcagtagtgaagaaagagtactacaaagacatcgaaagactggctaactac
ctgaacaagaacccagaattcactgttgaaatcgcgggtcacgcttctaacgtaggtaaa
ccagaatacaacatggttctgtctgacaagcgtgctgacgctgttgctaagatccttgtt
gaaaaatatggcatcagccaaagccgcgtaacttctaacggttacggtatcactaagcca
ttagtggctggtgactcgaaagaagctcatgcagctaaccgccgcatcgaagccatcgtg
acaactactgaaaaacaacctgttctgaagtaa
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