Shewanella sp. LZH-2: JM642_05550
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Entry
JM642_05550 CDS
T10525
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00260
Glycine, serine and threonine metabolism
shel00460
Cyanoamino acid metabolism
shel00630
Glyoxylate and dicarboxylate metabolism
shel00670
One carbon pool by folate
shel00680
Methane metabolism
shel01100
Metabolic pathways
shel01110
Biosynthesis of secondary metabolites
shel01120
Microbial metabolism in diverse environments
shel01200
Carbon metabolism
shel01230
Biosynthesis of amino acids
shel01240
Biosynthesis of cofactors
shel04981
Folate transport and metabolism
Module
shel_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JM642_05550
09102 Energy metabolism
00680 Methane metabolism
JM642_05550
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JM642_05550
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JM642_05550
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JM642_05550
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JM642_05550
Enzymes [BR:
shel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JM642_05550
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QRK80572
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Position
1238287..1239540
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AA seq
417 aa
AA seq
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MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYDEMERLAVEHKPKMMIGGFSAYSGI
VDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIIL
SAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVNNAKAMVE
VFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAEAKALTGWICDILDDAHNPAVIERVKGQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgtttaacgcaattcag
aatgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatggaagcgcaaggttcacaactaacgaataagtacgccgaaggctatcca
ggcaagcgttactacggcggttgtgagtatgtggacgtagttgaaaccttagcgattgag
cgtgcaaaacaactgtttggtgcgacctacgcaaacgtacaacctcactcaggttctcaa
gcaaacagcgccgtttacatggcattgttaaaaccaggcgataccgttttaggaatgaac
ttagcacacggtggtcacttgacccacggttcgccagtaaacttctccggtaagctatac
aacattattccttacggtatcgatgagtctggcaaaatcgactacgacgaaatggaacgt
ctggccgtagaacacaaacctaagatgatgatcggtggtttctctgcttactcaggcatc
gttgactgggcaagaatgcgcgaaatcgcagataaaattggtgcttacctgtttgttgac
atggcgcacgtggccggtcttattgctgctggcgtgtatccaaacccagtgccacacgct
cacgttgtgacgtcaactactcacaaaaccttagcgggtcctcgtggtggtatcattctg
tctgctgccgatgatgaagagttatacaaaaagctgaactctgcagtattccctggcggt
caaggcggtcctttgatgcacgttatcgcgggtaaagcggtcgccttcaaagaagcccta
gagccagagttcaaagcctaccaacaacaagtggttaacaacgctaaagccatggttgaa
gtgttcttagagcgcggttacaagatcgtctctggcggtactgataaccacttaatgctg
gtggacttaatcggtcgcgacttaaccggtaaagaagccgatgccgcgttaggtagcgcg
aacatcacagtaaacaaaaactctgtgccaaacgatccacgttctccattcgtgacctct
ggtgtgcgtatcggtacgcctgcgatcactcgccgtggctttaaagaagctgaagcgaaa
gcgttaaccggttggatctgtgacatcctcgacgatgcccacaatccagcggtcatcgag
cgcgtaaagggccaagtattggcactgtgcgcccgtttccctgtttacggttaa
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