KEGG   Shewanella sp. LZH-2: JM642_05550
Entry
JM642_05550       CDS       T10525                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
shel  Shewanella sp. LZH-2
Pathway
shel00260  Glycine, serine and threonine metabolism
shel00460  Cyanoamino acid metabolism
shel00630  Glyoxylate and dicarboxylate metabolism
shel00670  One carbon pool by folate
shel00680  Methane metabolism
shel01100  Metabolic pathways
shel01110  Biosynthesis of secondary metabolites
shel01120  Microbial metabolism in diverse environments
shel01200  Carbon metabolism
shel01230  Biosynthesis of amino acids
shel01240  Biosynthesis of cofactors
shel04981  Folate transport and metabolism
Module
shel_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:shel00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    JM642_05550
  09102 Energy metabolism
   00680 Methane metabolism
    JM642_05550
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JM642_05550
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    JM642_05550
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    JM642_05550
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    JM642_05550
Enzymes [BR:shel01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     JM642_05550
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Aminotran_5 OKR_DC_1 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: QRK80572
LinkDB
Position
1238287..1239540
AA seq 417 aa
MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYDEMERLAVEHKPKMMIGGFSAYSGI
VDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIIL
SAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVNNAKAMVE
VFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAEAKALTGWICDILDDAHNPAVIERVKGQVLALCARFPVYG
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgtttaacgcaattcag
aatgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatggaagcgcaaggttcacaactaacgaataagtacgccgaaggctatcca
ggcaagcgttactacggcggttgtgagtatgtggacgtagttgaaaccttagcgattgag
cgtgcaaaacaactgtttggtgcgacctacgcaaacgtacaacctcactcaggttctcaa
gcaaacagcgccgtttacatggcattgttaaaaccaggcgataccgttttaggaatgaac
ttagcacacggtggtcacttgacccacggttcgccagtaaacttctccggtaagctatac
aacattattccttacggtatcgatgagtctggcaaaatcgactacgacgaaatggaacgt
ctggccgtagaacacaaacctaagatgatgatcggtggtttctctgcttactcaggcatc
gttgactgggcaagaatgcgcgaaatcgcagataaaattggtgcttacctgtttgttgac
atggcgcacgtggccggtcttattgctgctggcgtgtatccaaacccagtgccacacgct
cacgttgtgacgtcaactactcacaaaaccttagcgggtcctcgtggtggtatcattctg
tctgctgccgatgatgaagagttatacaaaaagctgaactctgcagtattccctggcggt
caaggcggtcctttgatgcacgttatcgcgggtaaagcggtcgccttcaaagaagcccta
gagccagagttcaaagcctaccaacaacaagtggttaacaacgctaaagccatggttgaa
gtgttcttagagcgcggttacaagatcgtctctggcggtactgataaccacttaatgctg
gtggacttaatcggtcgcgacttaaccggtaaagaagccgatgccgcgttaggtagcgcg
aacatcacagtaaacaaaaactctgtgccaaacgatccacgttctccattcgtgacctct
ggtgtgcgtatcggtacgcctgcgatcactcgccgtggctttaaagaagctgaagcgaaa
gcgttaaccggttggatctgtgacatcctcgacgatgcccacaatccagcggtcatcgag
cgcgtaaagggccaagtattggcactgtgcgcccgtttccctgtttacggttaa

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