Shewanella sp. LZH-2: JM642_06280
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Entry
JM642_06280 CDS
T10525
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JM642_06280 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shel01007
]
JM642_06280 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shel03016
]
JM642_06280 (hisS)
Enzymes [BR:
shel01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
JM642_06280 (hisS)
Amino acid related enzymes [BR:
shel01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JM642_06280 (hisS)
Transfer RNA biogenesis [BR:
shel03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JM642_06280 (hisS)
Prokaryotic type
JM642_06280 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
XFP_C
Motif
Other DBs
NCBI-ProteinID:
QRK80700
LinkDB
All DBs
Position
1381584..1382861
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AA seq
425 aa
AA seq
DB search
MAKQIQAIRGMNDILPTQSPLWQKVEAVLRSSVAAYGYSEIRTPIVENTDLFKRSIGEVT
DIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYLGPMFRHERPQKG
RYRQFHQFGVEVYGIGSADIDAEVLMLSARLWEKLGISEHVTLELNTLGDPAERAAYREA
LIAFLEQHKDKLDEDSQRRMYSNPLRVLDSKDPQVQSILGDAPALMDYLGEESSQHFAQL
RELLDAVGIQYRVNPRLVRGLDYYNRTVFEWVTNSLGSQGTVLAGGRYDGLVAQLGGKDT
PAVGFAMGLERIVLLLETLELTQDIPAAVDVYVAAMGDSCLVEAIKVAQELRSALPTLRV
MSHCGGGNFKKQIKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQQRVARNALSAFL
AELSK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacagatccaagcgattcgcggaatgaatgacattctgccaactcaaagtcct
ctatggcaaaaagtggaagcggtactacgttcaagcgttgctgcttatggttacagcgag
atccgcactccaatagtggaaaataccgatctttttaaacgctctatcggtgaagtgact
gatattgttgaaaaagaaatgtacaccttcgaagatcgtaatggtgatagcctgacgtta
cgccccgaaggtactgcctcaaccgtgcgtgcgggtaacgagcatggtctgctttataac
caagaacaacgtctgtggtatttgggccccatgtttcgtcatgaacgtccacaaaaaggc
cgttaccgccaattccatcaatttggtgttgaagtctacggtattggtagcgctgatatc
gacgccgaagtgttgatgttatctgcccgtctatgggaaaaactcggcattagcgagcat
gtgacgcttgagctgaacactttaggcgatcctgccgagcgcgccgcttaccgtgaagcc
ttgattgcctttttagagcaacacaaggacaaactagacgaagatagccagcgccgtatg
tacagcaatccgctgcgcgtattggactcaaaagatccccaagtgcaaagcattttaggt
gatgcgcctgcgctgatggattacttaggcgaagaatcctcacaacattttgcacaattg
cgtgaactcctcgacgcggttggcatccaataccgagttaacccgcgcttagtccgtggt
ctggattactacaatcgcacggtttttgaatgggttaccaatagcttaggctctcaaggc
acagtacttgcgggcggtcgctacgatggtttagttgctcaattgggcggtaaagatacg
ccagccgtcggttttgcgatgggattagagcgcatcgttttactgcttgaaaccttagag
ctgacccaagatatcccagcggctgttgatgtgtatgtcgcggcgatgggggatagctgt
ttggttgaagccattaaagtggcgcaggagttacgctcagcgttgcccacactgcgagtg
atgagtcactgcggtggtggtaacttcaagaagcaaattaagcgtgccgacaaaagcggt
gcacaagtagccttactcatcggtgaagaagaactcgccgaaggtgtggttaccgtaaaa
tacttacgcaatgacaacgaacaacaacgggtcgctcgaaatgcattaagcgcattttta
gctgaacttagcaaataa
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