Shewanella sp. LZH-2: JM642_06295
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Entry
JM642_06295 CDS
T10525
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
shel Shewanella sp. LZH-2
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shel03009
]
JM642_06295 (der)
Ribosome biogenesis [BR:
shel03009
]
Prokaryotic type
GTPases
JM642_06295 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_24
AAA_22
cobW
ABC_tran
SRP54
Ras
Guanylate_kin
NOG1
Motif
Other DBs
NCBI-ProteinID:
QRK80703
LinkDB
All DBs
Position
1384773..1386239
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AA seq
488 aa
AA seq
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MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI
DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANKI
DGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIERQGEEEEVDER
QYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIP
MERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQDLG
LLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHL
FESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIVVIHG
NQVSKLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENKVEKLTMSQERRRKRALS
HIKDRKAK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgtagtggcccttgttggtcggccgaacgtcggtaaatccaccttatttaac
cgccttacgcgtacgcgtgatgcgctggttgctgactttcctggcctaacacgtgaccgt
aaatatggtcgagcattcttatccggctatgagtttatcgtggtagataccggcggtatc
gacggcactgaagaggggatcgaaactaagatggccgagcagtcccttgccgctatcgaa
gaagccgatgtagtcttatttatgaccgacgcgcgtgctgggttaaccgctgcggatttg
tctatcgctcagcatttacgtagccgccaaaaaaccacctttgtggtggctaacaagatt
gacggtattgatgccgactcggcctgcgccgaattttggtctttgggtttaggtgaagtc
tatcaaatggctgccgcccaaggtcgcggtgtaaccaatatgattgagtacgccttaact
ccttacgctgaagccatgggcattgagcgccaaggcgaagaggaagaagttgacgagcgt
cagtacactgaagaagaagccgaagctgagcaaaagcgtctacaggacttaccgatcaaa
ctcgccatcatcggtaaacctaacgtgggtaaatcgactctaaccaaccgtatcttaggt
gaagagcgtgtggtggtttatgacgaaccaggcaccactcgtgacagtatttacattccg
atggaacgcgatggtcgcgaatacgtgattatcgatactgctggtgtacgtcgccgcagt
aaagtccatgaagtgattgaaaagttctcggtgattaaaaccttgaaagcggttgaagat
gctaacgtggtgttacttatcatcgacgcccgtgaaggcgttgccgaacaagatcttggc
ctattagggtttgccctaaacgcaggccgtgcgttagtgattgccgttaacaagtgggat
ggcatcgaccaaggcattaaagaccgtgttaagagtgaactcgaccgtcgtttaggcttt
attgactttgcccgtattcactttatttcggcgctgcatggcacgggtgttggccatctg
tttgagtcgattgaagaagcttacgacagtgcgactcgccgcgtgagcacctcaatgctg
acccgcattatgcaaatgtcgcaggatgaccatcagccaccattggtgaacggtcgccgc
gtgaaactgaaatacgcccacgccggtggttataacccgccaatcgtggttattcacggt
aaccaagtcagcaagctaccggattcttacaagcgctacatgatgaactacttccgccgt
tcattaaaagtggttggtacgccaatccaactgcgtttccaagagggtgataacccgttt
gaaaacaaagtggaaaagctgaccatgagccaagagcgtcgccgtaaacgtgccttgagt
catattaaagaccgcaaggcaaaataa
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