Shewanella sp. LZH-2: JM642_07000
Help
Entry
JM642_07000 CDS
T10525
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
shel Shewanella sp. LZH-2
Pathway
shel02020
Two-component system
Brite
Two-component system [BR:
shel02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
JM642_07000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QRK80832
LinkDB
All DBs
Position
complement(1550353..1551732)
Genome browser
AA seq
459 aa
AA seq
DB search
MSLPNSIQDYSVLIIDDEPHIGTVLVQLFELEGIKAFATTDPKGIAKLLDRDWTGVVISD
VNMPQLDGISLMQQIRQQDPDLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHMLDV
VKRALDKRSLTLENRKLKKELESHNVPGPRILGHSVGILRMRHIIDQVIDTPADVLIEGE
TGTGKELVARYLHDHSSRNQANFVAINCGAIPENLIESELFGAEAGAFTGVDKLRIGKFE
YANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSIHLDIRVIAATKVDLKSLCD
TGEFRQDLLYRLNLVTVPIPPLRDRREDIPLLFLHFARMASARYHKALIALNAEQNAILT
SHDWPGNVRELRNLAERYVLLGGEAAFAGTLGNAPSLHTSMSLLQRVEFFERVLIEEALS
HNKGSIKQTMEQLELPRKTLYDKMRKYDLDRKQYINADE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcccaattcaattcaagactatagcgtactgatcatcgacgatgagccccat
attggcacagtcctagtacaactgtttgagcttgaaggcatcaaagcctttgccaccacc
gatcctaaaggcattgctaaactccttgatagagactggacaggtgtggtgatttcagat
gtgaatatgccgcaactcgatggcatcagcctaatgcagcaaattcgccagcaagatccc
gatttacccgtcgtgctactcactggctttggcgatatcgctatggcagtcaatgcgtta
aagcaaggtgcctacgattttctcgaaaaaccctttaacaacgagcatatgttagatgtg
gtgaaacgtgccttggataaacgcagcctcaccctcgaaaaccgcaagttaaagaaagag
ttagaaagccataacgtgccagggccgagaatattaggccacagcgtcggcattttgcgt
atgcgccatattatcgaccaagttatcgacacccccgcagatgtgcttatcgaaggtgaa
actggcacgggtaaagaattggtcgcccgctatctgcatgaccacagtagtcgcaatcag
gccaactttgtcgctattaactgcggcgctattcctgaaaatttaattgagagcgaactc
tttggtgccgaagccggcgcgtttaccggcgtcgataagctacggataggtaagtttgag
tacgctaatggtggcacactctttttagatgaaatcgaaagtacaccgctgtcgttacaa
gtcaaactgctgcgggtgctcgaagatcgcaaggtcgaacgcctaggctccaataaaagc
atccatttggacattcgggtgattgccgccactaaagtggatttaaagtccctatgtgac
acaggggaattccgccaagacttgctctatcgcttgaatctggtgactgtgccaattcca
ccactcagggatcgccgcgaagatatccctttattgttcttacattttgctcgtatggca
tcagcgcgctatcacaaggccttgattgccctcaatgccgagcaaaatgccatccttacc
tcccacgattggccgggtaatgtgcgcgaacttagaaatctggcagagcgttatgtgtta
ctcggtggtgaagccgccttcgctggcaccttaggtaatgcaccgagtctgcataccagt
atgtccttactgcaacgggttgagttttttgagcgagtcttgattgaagaggccttaagt
cataacaagggcagtattaagcaaaccatggaacaactcgaactgccccgcaaaaccttg
tacgacaagatgcgtaagtacgatttagaccgcaagcaatatatcaacgccgacgagtaa
DBGET
integrated database retrieval system
