Shewanella sp. LZH-2: JM642_07020
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Entry
JM642_07020 CDS
T10525
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
shel Shewanella sp. LZH-2
Pathway
shel02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JM642_07020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shel02000
]
JM642_07020
Transporters [BR:
shel02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JM642_07020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctP
Geminin
Motif
Other DBs
NCBI-ProteinID:
QRK80836
LinkDB
All DBs
Position
complement(1555747..1556766)
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AA seq
339 aa
AA seq
DB search
MTLNQQTGLTRPLKTLVKMLAVASVFATSFNVFAEPIEIKFSHVVAENTPKGQMALKFKE
LVEQRLPGEYKVSVFPNSQLFGDNNELAALLLNDVQFVAPSLSKFERYTKRLQVFDLPFL
FNDMDAVNRFQQGEAGQALLNSMSRKGIVGLGYLHNGMKQFSANAPLKQPSDAKGLKFRV
MASDVLAAQFDAVGAIPVKKPFSEVFTLLQTRAIDGQENTWSNTYSQKFYEVQSHITESN
HGVLDYMVVTSDAFWKSLPADKRKVIKEALDESIALGNKIAAEKDNEDKQLILDSKRSQL
VTLTPAERQQWVDVMKPVWAKFEDQVGKDVIEAAVAANK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacattgaatcaacaaactggattgacccgtccactcaaaaccttagtcaaaatgctc
gccgttgcctcagtattcgcaaccagctttaacgtatttgcagaaccgattgaaattaag
ttttcgcatgttgtggcagaaaatacgcccaaaggccaaatggcactgaagtttaaagaa
ctcgttgagcaacgtttaccgggtgaatacaaggtcagtgtatttcctaactcacagtta
tttggggataacaacgagttagcagcactattgctaaatgatgtgcaatttgtagcacct
tcactctcaaaatttgaacgttacaccaaacgcttacaagttttcgacttgcctttcctg
ttcaatgacatggatgcagtaaaccgtttccaacagggtgaagccggtcaagcattactc
aactcaatgagccgcaaagggattgtgggtttaggctatttacataatggtatgaagcag
ttttctgctaacgcaccactcaagcaaccttccgatgctaaaggcttaaaattccgtgta
atggcatctgacgtattagccgcacaatttgatgctgttggcgctatcccagtgaaaaaa
ccattctctgaagtgttcaccctgctacaaacccgcgcgattgacggtcaagaaaacact
tggtctaacacttactcacaaaaattctatgaagttcaaagccatattacagaaagtaac
catggcgtattggattacatggtcgtgacctctgatgccttctggaaaagcttacctgcg
gataaacgtaaagtgatcaaagaagcattagacgaatctatcgctttaggtaacaagatc
gctgcagaaaaagataacgaagacaagcaattaatccttgattcaaaacgttctcaattg
gtgaccttaaccccagcagaacgtcaacaatgggttgatgtgatgaaaccagtatgggct
aagtttgaagaccaagtcggtaaagatgtgattgaagccgctgttgctgcaaataaataa
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