Shewanella sp. LZH-2: JM642_07115
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Entry
JM642_07115 CDS
T10525
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel03410
Base excision repair
Brite
Enzymes [BR:
shel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
JM642_07115
Transcription factors [BR:
shel03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JM642_07115
DNA repair and recombination proteins [BR:
shel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JM642_07115
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QRK80840
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Position
1563909..1565534
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AA seq
541 aa
AA seq
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MKLIAVSPKPTTKPLVVPVINDLQECYLSATICREARISRDPRFDGKFFVGVLSTGIYCR
TVCPAVAPKEENVRYFDSAIKAAQAGLRPCLRCRPDSAPGSNPWKGTGTTLDRAIGLIEA
GALSGEHGLTVEALADKLGISSRYLNKLFTSGFGTSPKQFALYRQLMFAKQLLHQTQLPI
TQVALAAGFNSIRRFNEAFQQSLQLTPTQLRKSSLKSTAKLEEGERTNKASPQQMPVHSL
SLYQYYRPPLDWPAQLAFYRLRAVAGMEWFCEGANHDSNDMMPQDTLEYGRTLQLEDIRA
VVRIAHEAHLHRFKITLTLTPDSPLAGLQKLITQVRRILDLDADMQLIEHNLQRLTDLKL
IPKSGLRIPGAGSLFEAGCRAVLGQQVSVVQATKLLNLLVEAYGERFSLNGQEYRLFPTP
QLIRHACLDELKMPGARKLALNALAAFIYEHPEATADDWIRVKGIGPWTIAYAKLCGLGD
PNIFLHTDLIVKKQLLATMGEQTGLDTEAQKQQDYSAIVERISADIAPWGSYLTFLLWSN
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgatagcagtgagtccaaaaccaaccactaaaccactagtcgtgccggtaata
aacgatttgcaagagtgctacttatccgcgacgatttgccgcgaggctcgcatcagccgt
gatccacgttttgacggtaagttctttgtgggcgtgttaagtacgggtatttactgccga
actgtgtgccctgccgttgcacctaaagaagaaaacgtacgttatttcgactcggccatt
aaagccgcacaggcggggctgaggccttgcctacgttgccgccccgacagtgcaccaggc
tctaatccgtggaaaggtacaggcacaaccctagacagagctataggtttgattgaagct
ggcgccttatcgggtgagcatggattaacggtcgaggccttggcggacaaactggggatc
agcagccgttatctaaataagttatttacctctggatttggcacttcgcctaagcaattt
gcactctatcgtcagttaatgttcgcaaaacagttgttgcatcagacgcagctgcccatc
actcaggttgcgcttgccgcaggctttaacagtattcgccgtttcaacgaggcatttcag
cagtcgctgcaattaacgcccacacagttaagaaaatccagtctgaagtcgactgccaag
ttagaggaaggggagagaactaataaggctagtccacagcagatgccagtgcatagtttg
agtctatatcagtattaccgaccgccgctcgattggccggcgcaattagctttttatcgc
ctgcgcgccgtggcgggaatggagtggttttgtgagggggcaaatcatgactccaacgac
atgatgccccaagatacacttgagtatggtcgcaccctgcaacttgaggatatccgcgca
gtggtgcgtatcgcccatgaggcacatttgcatcgctttaaaatcacgctgacattaaca
cccgactcgcccttggcgggcctacaaaaactcatcacccaagtgcggcgcattttagat
ctcgatgccgatatgcagctgattgagcacaacctacagcgtttgaccgatcttaagtta
atccctaaatcaggtcttaggatcccgggagcaggatctttatttgaggcgggttgccga
gccgttttaggtcagcaggtgagcgtagtgcaggccactaagttactcaatttattggtc
gaagcttatggcgaacgttttagcttaaacgggcaagagtatcgcttgttccctacaccg
cagctgatccgtcatgcctgcctcgatgagcttaaaatgcctggcgcgcgcaaactggcg
ctcaacgcgcttgcagcgtttatctatgagcacccagaagccacagccgatgattggatt
agggtaaaaggcattggcccctggaccattgcctatgccaaattatgtgggcttggcgat
ccaaatatcttcctgcacacggatttaattgtgaaaaagcaattactggcgacgatgggt
gagcagacagggttggatactgaagcacaaaaacaacaggattattcagcgattgttgag
cggatcagtgcggatatcgccccttgggggagttatttgaccttcctgctgtggtccaat
gcatag
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