Shewanella sp. LZH-2: JM642_07310
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Entry
JM642_07310 CDS
T10525
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00071
Fatty acid degradation
shel00280
Valine, leucine and isoleucine degradation
shel00310
Lysine degradation
shel00362
Benzoate degradation
shel00380
Tryptophan metabolism
shel00410
beta-Alanine metabolism
shel00640
Propanoate metabolism
shel00650
Butanoate metabolism
shel00907
Pinene, camphor and geraniol degradation
shel00930
Caprolactam degradation
shel01100
Metabolic pathways
shel01110
Biosynthesis of secondary metabolites
shel01120
Microbial metabolism in diverse environments
shel01200
Carbon metabolism
shel01212
Fatty acid metabolism
Module
shel_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JM642_07310 (fadJ)
00650 Butanoate metabolism
JM642_07310 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
JM642_07310 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JM642_07310 (fadJ)
00310 Lysine degradation
JM642_07310 (fadJ)
00380 Tryptophan metabolism
JM642_07310 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JM642_07310 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JM642_07310 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JM642_07310 (fadJ)
00930 Caprolactam degradation
JM642_07310 (fadJ)
Enzymes [BR:
shel01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JM642_07310 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JM642_07310 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JM642_07310 (fadJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LEM
LSDAT_euk
Motif
Other DBs
NCBI-ProteinID:
QRK80877
LinkDB
All DBs
Position
1606970..1609087
Genome browser
AA seq
705 aa
AA seq
DB search
MEKTFNLTRREDGIAILTMDVPGETMNTLKAEFGPEISEILSEIKRDSSIRGLVLISGKK
DSFVAGADISMLDACQTAGDAKALSLQGHVVFNELEALNIPVVAAIHGACLGGGLELALA
CHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKM
GLVNDVVPQTILLQTAVEMALAGKKTAKPVKKSLVNQLLEGTGFGRNIIFDQAAKQVAKK
TQGNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKESEALRSIFFATTEMKKET
GAEGATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKDINEKGLSNALSYAYKLLDK
GVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFEDLALKHQMVKDIERECGEHT
IFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPITLLDE
VGIDVGAKIAPILEKELGERFKAPTAFDKLLNDDRKGRKNGKGFYQYGAASKKKAVDESV
YGVLGIKPGVDKEMSAVAERCVVQMLNEAVRCLDEGIIASPRDGDIGAIFGIGFPPFLGG
PFHYIDTLGADNLVKILERYQTQYGDRFEPCPRLKAMAAEKARFF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacatttaatttaacccgccgtgaagacggtatcgccattctaacgatggac
gtacccggcgaaaccatgaataccctcaaggcagagtttggccctgagatcagtgagatc
ctgtctgagattaaacgcgattcgagtatccgtggcctagtgctgatttcgggcaaaaaa
gattcatttgttgccggtgccgatatctctatgcttgatgcttgccaaacggcgggcgat
gctaaagccttatccctgcaagggcatgtggtgtttaacgagttagaagccttaaatatc
cctgtggttgcagctattcatggcgcctgtttaggaggcggtttagagctcgcgctcgca
tgccatcaacgtgtgtgcagtgatgatggcaagaccatgctgggcgtacccgaagtgcaa
ctcggtttattacccggtggtggtggtactcagcgtttgcctcgtttagtgggcattacc
actgcgctggatatgatgttgacaggtaaacaaattcgtccaaaacaagcgttaaagatg
ggtttagttaacgatgtggtgccacagactattttactgcaaaccgcagtggagatggcg
cttgcgggtaaaaaaacagctaagccagttaaaaaatcactagtaaaccaattgcttgaa
ggtactggctttggtcgcaacattatttttgatcaagccgctaagcaagtcgctaagaaa
acccaagggaactaccccgcgcctgcaaaaattattgattgcgtgcgtcaaggtatggcg
aagggaatgcaaaaagggcttgaggtagaagccagccattttgctgaactggtggtgtcg
aaagaatctgaagcgctgcgcagtattttctttgcaaccacagagatgaagaaagaaacc
ggcgccgaaggggcaacaccacgtaaagtcaaaaaagccgtgatcttaggtggcggtttg
atgggcggtggtattgcttcggtcaccacgactaaggctaaaatccctgcgcgggtaaaa
gacattaacgaaaagggcttaagcaacgcgctttcctacgcctataagttattggataaa
ggcgttaaacgtcgtcatatgacgccagctgcacgcgacaatttaatggcgctgatgaca
acgacaacagaatataaaggcgttaaggatgccgatattgttgttgaagcggtatttgag
gatttagcgctcaaacatcaaatggttaaagatattgagcgtgaatgcggtgagcacacg
atttttgcgtctaacacctcatcattacccattggccaaattgcacaagcggcaagccgt
cctgaaaatgtgattggcttacattacttctcaccagtagaaaaaatgccgctggtggaa
gtgattgcccacgccaaaacctccccagaaaccattgccaccacggtcgcttttgcccgc
aaacagggtaaaacgccaatcgtagtacaagatggcgcggggttttatgttaaccgcatc
ctcgcgctttatatgaacgaagccgcacaattgctgctagaagggcaaagtgttgaacat
ctcgataaagcgttagtgaagtttggtttccccgttggccctattactttgcttgatgaa
gtcggtattgatgtgggcgctaaaatcgctcccattcttgaaaaagagcttggcgagcgc
tttaaagccccaactgctttcgacaagctgttaaatgacgatagaaagggccgtaaaaat
ggcaaaggtttctatcagtatggcgctgctagcaagaaaaaagccgtcgatgaaagtgtg
tatggtgtattaggcatcaagcctggtgtcgataaagaaatgagcgcggtagcggaacgc
tgtgtagtgcaaatgctcaatgaagctgtgcgctgcttagatgaaggcattattgcctca
ccgcgcgatggtgatattggcgccatctttggtattggtttcccaccattcttaggtggc
ccattccattatatcgatactttaggcgcggataacttagtcaaaatacttgaacgttat
caaacgcaatatggcgatcgatttgagccttgcccacgccttaaggcgatggcggcagaa
aaagctcgcttcttctaa
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