Shewanella sp. LZH-2: JM642_08025
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Entry
JM642_08025 CDS
T10525
Name
(GenBank) sodium ion-translocating decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
shel Shewanella sp. LZH-2
Pathway
shel00362
Benzoate degradation
shel00620
Pyruvate metabolism
shel00650
Butanoate metabolism
shel01100
Metabolic pathways
shel01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
JM642_08025
00650 Butanoate metabolism
JM642_08025
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JM642_08025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shel02000
]
JM642_08025
Enzymes [BR:
shel01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
JM642_08025
Transporters [BR:
shel02000
]
Other transporters
Primary active transporters [TC:
3
]
JM642_08025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
QRK81009
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All DBs
Position
1792958..1794088
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AA seq
376 aa
AA seq
DB search
MDGLLAFWAETGIAHFTAGQVLMMAVGVLLLYLAIVRGFEPLLLLPIGFGAVLANIPNAG
FTQEGGILYYAYHVGIETGVFPLLIFMGVGALTDFSALIANPKTLLLGAAAQFGIFATLI
GAIALNLVPGFEFTMQDAAAIAIIGGADGPTAIFLASKLAPELLGAIAVAAYSYMALVPI
IQPPIMRLLTTQAEREIKMEQLREVSKKERIIFPLMVLGLTILFLPAATPLVGMFCLGNL
MRESGVVDRLSKTAQNELINIVTIFLGLAVGSKLSAEQFLRVETLGILVLGALAFGIGTA
AGVLMAKLMCKLSGGKVNPLIGAAGVSAVPMAARVVNKVGLEANQHNFLLMHAMGPNVAG
VLGSAVAAGILLAVLG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggatggtttactggcgttttgggccgaaacgggcatagcccattttaccgcggggcaa
gtcttaatgatggccgttggagtgctactgttatatctcgctatcgtgcgtggatttgag
cctttgttgctgttgcctattggctttggcgcagtgctggcgaatattcccaacgcaggt
tttacccaagagggtggaatactctactacgcctatcatgtggggattgaaaccggtgtt
tttccactactgatctttatgggagtcggggcgctgacagattttagtgcccttattgcc
aatccaaagacgttgttgctcggtgccgcagcgcagtttgggatcttcgcgaccttaatt
ggcgctatcgccctaaatctggtgccaggctttgaatttactatgcaggatgccgccgct
attgccattatcggtggggcagatggaccgacagcaattttcctcgcctcaaagcttgcg
cccgaattacttggagcgattgctgtggcggcttattcctatatggcgttggtgcctatt
attcagccgccgatcatgcgtttactcacaacccaagcggagcgtgagataaaaatggag
cagctacgggaagtcagtaaaaaggagcggattatttttccgctgatggtattaggctta
accattctgtttttacccgcggcaacgccactggtagggatgttttgcctgggtaactta
atgcgcgaatcgggcgtggtggataggctttcaaaaacagcacaaaacgagcttattaat
atcgtgacgatttttttgggcttagctgtcggctctaaattatcggccgagcagtttttg
cgggtagaaaccttggggatcttagtacttggtgcccttgcttttggtataggtacggcc
gcaggagtgttgatggcaaaactgatgtgtaagttatccggcggtaaggttaatccactg
attggggcggcaggagtatcggctgtgcctatggctgcaagggtagtgaataaagtggga
ttagaggccaatcagcataactttctattaatgcatgctatggggccaaatgttgccggc
gtgctaggttctgcggtcgctgcggggatactacttgccgtactcggctaa
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