Shewanella sp. LZH-2: JM642_08055
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Entry
JM642_08055 CDS
T10525
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
shel Shewanella sp. LZH-2
Brite
DNA repair and recombination proteins [BR:
shel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JM642_08055
Archaeal homologous recombinant proteins
JM642_08055
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QRK81015
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Position
1798190..1799389
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AA seq
399 aa
AA seq
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MRFIHTSDWHIGRQLHNQSLLDDQAYVLDQIVALAQQHSVDAVIIAGDIYDRSIPPASAV
ALLNDVLNRLINQLGIQVLMIAGNHDGHERLGFAAKQMAASGLHIIGPLQAELVPIRLTS
ASGDAYFYPLPYAEPATVRQVFETDAKGLSVSSHEEAMALLLEQVRCHDSQGLPKVVVSH
CFLDGGSESESERPLSIGGADKISPRLFSEFDYVALGHLHGPQYKGCEQIRYSGSILKYS
FSEQHQHKSVTLVDIAAQSPAQIQLLPLTALRDVRIIEGELAHLLAVGKTDAKREDYLMV
RLLDKHAILDAMGKLRSVYPNVLHLERTGLMAGDQAVVLNRDHIKKGEMAMFRDFFAQVS
GDELTPAQQAVMEDILTQLHRDELERSETHRDVKEEQAE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttattcacacctcagactggcatattggccgtcagttacataatcaatcatta
ctggatgatcaggcctatgtacttgatcaaattgttgcattggcgcagcagcacagtgtt
gatgcggtgattattgcgggggatatttacgatagatcgattccacccgccagtgccgtc
gctttgcttaatgatgtgcttaatcgccttattaaccaattgggtatacaagtgctgatg
attgctggcaatcacgatggccatgagcgtttgggatttgctgctaaacaaatggctgcc
agtggtttacatattattgggccgctacaggccgaattagtgcctattcgtttaaccagt
gccagtggcgatgcttacttttatccgcttccttatgccgaacctgccaccgtgcgccaa
gtgtttgaaaccgatgccaaaggccttagcgtatcgagccatgaagaggcgatggcgttg
ttgctagagcaggtccgttgccatgatagccaaggtttacctaaagtggtggtgagtcat
tgctttttggatggtggcagcgagtctgaatccgaacggccattaagtatcggcggcgcg
gataaaatttccccacggctgtttagtgagtttgactatgtcgcgcttggacatttgcat
ggtccgcaatataaaggctgcgaacagatacgttactccggctcaatcctaaagtattcc
tttagtgagcaacaccagcataagtctgtcaccttagtggatatcgctgcgcaatctccc
gctcaaatccaactcttacccttaactgcgctacgtgatgtgcggataattgaaggtgaa
ttggcacatttattagcagtagggaaaaccgatgccaagcgtgaggattatttaatggtg
cgtctgctcgataaacacgccattttagatgccatgggcaaactgcgcagtgtttatccc
aatgtgctgcatttagaacgcaccggattgatggcgggcgatcaggcggtggtgctcaat
cgagatcatataaaaaaaggtgaaatggccatgttccgtgacttttttgcccaagtctcg
ggggatgaattaacgccggcgcagcaggcggtgatggaggatatcctaacccagcttcat
cgagacgaacttgaacgcagcgaaacacatcgtgacgtaaaagaggagcaggcagaatga
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